{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":377765056,"defaultBranch":"main","name":"PDBminer","ownerLogin":"ELELAB","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-06-17T08:50:49.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/12696253?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1709284144.0","currentOid":""},"activityList":{"items":[{"before":"c64e8b34a3ad121c8416e810be7cb2811d6362cb","after":"cf33ec16d8e2998ec0e26f55e2771779a492b4a1","ref":"refs/heads/main","pushedAt":"2024-03-05T13:28:11.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"elenapapaleo","name":null,"path":"/elenapapaleo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12696167?s=80&v=4"},"commit":{"message":"Merge pull request #79 from ELELAB/fix#77_uniprot_PDB_mismatch\n\nwarning and alignment updates","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2162946674\" data-permission-text=\"Title is private\" data-url=\"https://github.com/ELELAB/PDBminer/issues/79\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/ELELAB/PDBminer/pull/79/hovercard\" href=\"https://github.com/ELELAB/PDBminer/pull/79\">#79</a> from ELELAB/fix#77_uniprot_PDB_mismatch"}},{"before":"8f59fc9fdfc0f67822a97e484bbc1e80485fce34","after":"83a51425f4d24b9c7e1a63e064966d565b368ac2","ref":"refs/heads/fix#77_uniprot_PDB_mismatch","pushedAt":"2024-03-01T11:14:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"small fix","shortMessageHtmlLink":"small fix"}},{"before":null,"after":"8f59fc9fdfc0f67822a97e484bbc1e80485fce34","ref":"refs/heads/fix#77_uniprot_PDB_mismatch","pushedAt":"2024-03-01T09:09:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"warning and alignment updates","shortMessageHtmlLink":"warning and alignment updates"}},{"before":"9f1a9eab5defef7f7899118b1c189ee2a190ad4f","after":"c64e8b34a3ad121c8416e810be7cb2811d6362cb","ref":"refs/heads/main","pushedAt":"2024-02-16T12:55:18.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"mtiberti","name":"Matteo Tiberti","path":"/mtiberti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3448904?s=80&v=4"},"commit":{"message":"Merge pull request #70 from ELELAB/fix#69_new_biopython\n\ndependency updates","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2004544220\" data-permission-text=\"Title is private\" data-url=\"https://github.com/ELELAB/PDBminer/issues/70\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/ELELAB/PDBminer/pull/70/hovercard\" href=\"https://github.com/ELELAB/PDBminer/pull/70\">#70</a> from ELELAB/fix#69_new_biopython"}},{"before":"3fc6fc29475bb8d6d3d957a75d01ecab6e44e8da","after":"5a7299de1b13c09d32f804b1a049d8379e68096b","ref":"refs/heads/fix#69_new_biopython","pushedAt":"2024-02-16T12:50:02.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"Merge branch 'main' into fix#69_new_biopython","shortMessageHtmlLink":"Merge branch 'main' into fix#69_new_biopython"}},{"before":"d979b430dc88f0084d948119fbd962228d19826b","after":"3fc6fc29475bb8d6d3d957a75d01ecab6e44e8da","ref":"refs/heads/fix#69_new_biopython","pushedAt":"2024-02-16T12:39:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"updated lists","shortMessageHtmlLink":"updated lists"}},{"before":"e0aa40e712362e18222bc8368fae10862b832681","after":"9f1a9eab5defef7f7899118b1c189ee2a190ad4f","ref":"refs/heads/main","pushedAt":"2024-02-08T08:29:06.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"mtiberti","name":"Matteo Tiberti","path":"/mtiberti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3448904?s=80&v=4"},"commit":{"message":"Merge pull request #73 from ELELAB/fix#72_file_save\n\noption to save PDBs","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2121054081\" data-permission-text=\"Title is private\" data-url=\"https://github.com/ELELAB/PDBminer/issues/73\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/ELELAB/PDBminer/pull/73/hovercard\" href=\"https://github.com/ELELAB/PDBminer/pull/73\">#73</a> from ELELAB/fix#72_file_save"}},{"before":"434fe46a3c472341718407f28e1ccc310a92bcbb","after":"3c26c464854aa8ed2a31468606d542b2ace66edb","ref":"refs/heads/fix#72_file_save","pushedAt":"2024-02-08T08:28:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"update_metavar","shortMessageHtmlLink":"update_metavar"}},{"before":"d262110d693f1b5d2b7a7a63e2cd32756d675b85","after":"434fe46a3c472341718407f28e1ccc310a92bcbb","ref":"refs/heads/fix#72_file_save","pushedAt":"2024-02-08T07:58:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"remove space","shortMessageHtmlLink":"remove space"}},{"before":"b4e85ff1ff5f863a52f4944ce9bc1f675847524e","after":"d262110d693f1b5d2b7a7a63e2cd32756d675b85","ref":"refs/heads/fix#72_file_save","pushedAt":"2024-02-08T07:57:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"emopty row removal","shortMessageHtmlLink":"emopty row removal"}},{"before":"d0f9e262a42eab72d1d1f6174565b7366720aa71","after":"b4e85ff1ff5f863a52f4944ce9bc1f675847524e","ref":"refs/heads/fix#72_file_save","pushedAt":"2024-02-08T07:55:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"remove whitespace","shortMessageHtmlLink":"remove whitespace"}},{"before":"03314b92dd80488da04be777197e0c8ccc4b8c56","after":"e0aa40e712362e18222bc8368fae10862b832681","ref":"refs/heads/main","pushedAt":"2024-02-08T07:46:56.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"Merge pull request #71 from realalanc/main\n\nBug fix for issue #75, handling missing gene names in uniprot.","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2104091010\" data-permission-text=\"Title is private\" data-url=\"https://github.com/ELELAB/PDBminer/issues/71\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/ELELAB/PDBminer/pull/71/hovercard\" href=\"https://github.com/ELELAB/PDBminer/pull/71\">#71</a> from realalanc/main"}},{"before":null,"after":"43391fe47ba4ad78d4c3f93e4c0860e58c52393f","ref":"refs/heads/fix#74_uniprot_ids","pushedAt":"2024-02-07T09:42:15.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"handle missing genes","shortMessageHtmlLink":"handle missing genes"}},{"before":null,"after":"d0f9e262a42eab72d1d1f6174565b7366720aa71","ref":"refs/heads/fix#72_file_save","pushedAt":"2024-02-06T15:20:57.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"option to save PDBs","shortMessageHtmlLink":"option to save PDBs"}},{"before":"c14a687c5e42aa760bb57ec7ba74c7ca84235553","after":"03314b92dd80488da04be777197e0c8ccc4b8c56","ref":"refs/heads/main","pushedAt":"2023-11-24T08:47:06.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"mtiberti","name":"Matteo Tiberti","path":"/mtiberti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3448904?s=80&v=4"},"commit":{"message":"Merge pull request #68 from ELELAB/fix#67_update_readme\n\nUpdate README.md with biopython version","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2004111440\" data-permission-text=\"Title is private\" data-url=\"https://github.com/ELELAB/PDBminer/issues/68\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/ELELAB/PDBminer/pull/68/hovercard\" href=\"https://github.com/ELELAB/PDBminer/pull/68\">#68</a> from ELELAB/fix#67_update_readme"}},{"before":null,"after":"d979b430dc88f0084d948119fbd962228d19826b","ref":"refs/heads/fix#69_new_biopython","pushedAt":"2023-11-21T15:26:30.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"dependency updates","shortMessageHtmlLink":"dependency updates"}},{"before":null,"after":"3bbe721cb455bb6db1e33350af8744b9efe378af","ref":"refs/heads/fix#67_update_readme","pushedAt":"2023-11-21T11:53:41.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"Update README.md with biopython version\n\nfix #67 with more verbose readme. To update the script to fit newest BioPython version in the future.","shortMessageHtmlLink":"Update README.md with biopython version"}},{"before":"d1dfa11d58032fa1e557c29889c4d09143723da9","after":"c14a687c5e42aa760bb57ec7ba74c7ca84235553","ref":"refs/heads/main","pushedAt":"2023-10-06T12:48:03.000Z","pushType":"pr_merge","commitsCount":25,"pusher":{"login":"mtiberti","name":"Matteo Tiberti","path":"/mtiberti","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3448904?s=80&v=4"},"commit":{"message":"Merge pull request #66 from ELELAB/fix#64_mmCIF_bfactor\n\nmmCIF, r-free and b-factor","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1873095309\" data-permission-text=\"Title is private\" data-url=\"https://github.com/ELELAB/PDBminer/issues/66\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/ELELAB/PDBminer/pull/66/hovercard\" href=\"https://github.com/ELELAB/PDBminer/pull/66\">#66</a> from ELELAB/fix#64_mmCIF_bfactor"}},{"before":"8107c86907d9b4940dbf4085a37419152aeaea8b","after":"0b038ecf02e6f17ea5d41feebf9ec12ee82c4384","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-06T12:22:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"backend and spelling","shortMessageHtmlLink":"backend and spelling"}},{"before":"64c0fcc975c43c760128d0dfe87ebbdc9b17b3a9","after":"8107c86907d9b4940dbf4085a37419152aeaea8b","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-06T12:04:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"windows compatible","shortMessageHtmlLink":"windows compatible"}},{"before":"48a3ad51d87f656edf25f5d0a6c2d6943b2829ed","after":"64c0fcc975c43c760128d0dfe87ebbdc9b17b3a9","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-06T09:52:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"package_update","shortMessageHtmlLink":"package_update"}},{"before":"8bb22171d00182ab73e6a0b034c60e1d23fffde3","after":"48a3ad51d87f656edf25f5d0a6c2d6943b2829ed","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-06T08:28:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"updated time run","shortMessageHtmlLink":"updated time run"}},{"before":"218dd26e3c0dcff7f0ab0c8ee1ea4c7d2256aadd","after":"8bb22171d00182ab73e6a0b034c60e1d23fffde3","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-05T12:27:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"rerun examples and time","shortMessageHtmlLink":"rerun examples and time"}},{"before":"ee77231a6a180884df8d114aa995ba8d33af7b4f","after":"218dd26e3c0dcff7f0ab0c8ee1ea4c7d2256aadd","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-05T07:40:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"documentation","shortMessageHtmlLink":"documentation"}},{"before":"d1e8a6c0f3931145b1af48e8cb6d00cf80ce3de3","after":"ee77231a6a180884df8d114aa995ba8d33af7b4f","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-04T20:05:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"option update PDBminer2coverage","shortMessageHtmlLink":"option update PDBminer2coverage"}},{"before":"0ddf404028f85723c19513cb41dbc3bfc34324bc","after":"d1e8a6c0f3931145b1af48e8cb6d00cf80ce3de3","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-04T19:36:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"adding the logger module","shortMessageHtmlLink":"adding the logger module"}},{"before":"ac890da08b437ed05164daf2cc0b6052db6266e4","after":"0ddf404028f85723c19513cb41dbc3bfc34324bc","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-04T18:51:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"small specific changes to PDBminer script","shortMessageHtmlLink":"small specific changes to PDBminer script"}},{"before":"0337a9d9e4234d2c0c0c701bb01f07b649398b5d","after":"ac890da08b437ed05164daf2cc0b6052db6266e4","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-02T17:55:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"Update README.md\n\nREADME corrections.","shortMessageHtmlLink":"Update README.md"}},{"before":"6d9b2839b61848d472b4b9b3578cc4c8092a31c0","after":"0337a9d9e4234d2c0c0c701bb01f07b649398b5d","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-02T17:41:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"PDBminer2network update","shortMessageHtmlLink":"PDBminer2network update"}},{"before":"25d201e90c847f6edb655fab5c265a128e109522","after":"6d9b2839b61848d472b4b9b3578cc4c8092a31c0","ref":"refs/heads/fix#64_mmCIF_bfactor","pushedAt":"2023-10-02T13:45:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DegnKristine","name":"Kristine Degn","path":"/DegnKristine","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/84312237?s=80&v=4"},"commit":{"message":"addition of schema","shortMessageHtmlLink":"addition of schema"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEDN-aEQA","startCursor":null,"endCursor":null}},"title":"Activity · ELELAB/PDBminer"}