diff --git a/lerna.json b/lerna.json index 6b8c95248f..0392371826 100644 --- a/lerna.json +++ b/lerna.json @@ -1,5 +1,5 @@ { - "version": "2.10.3", + "version": "2.11.0", "npmClient": "yarn", "$schema": "node_modules/lerna/schemas/lerna-schema.json" } diff --git a/packages/app-core/package.json b/packages/app-core/package.json index 9c81337462..367bf4f0a7 100644 --- a/packages/app-core/package.json +++ b/packages/app-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/app-core", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 code shared between the 'full featured' apps e.g. jbrowse-web and jbrowse-desktop", "keywords": [ "jbrowse", @@ -42,7 +42,7 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/product-core": "^2.10.3", + "@jbrowse/product-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "copy-to-clipboard": "^3.3.1", diff --git a/packages/core/package.json b/packages/core/package.json index feaff5cb2d..2a7a3b821d 100644 --- a/packages/core/package.json +++ b/packages/core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/core", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 core libraries used by plugins", "keywords": [ "jbrowse", diff --git a/packages/embedded-core/package.json b/packages/embedded-core/package.json index 1f3f64ed9b..724f424e2a 100644 --- a/packages/embedded-core/package.json +++ b/packages/embedded-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/embedded-core", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 code shared between embedded products", "keywords": [ "jbrowse", @@ -42,7 +42,7 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/product-core": "^2.10.3", + "@jbrowse/product-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "copy-to-clipboard": "^3.3.1", diff --git a/packages/product-core/package.json b/packages/product-core/package.json index d4e20feced..46d89680c1 100644 --- a/packages/product-core/package.json +++ b/packages/product-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/product-core", - "version": "2.10.3", + "version": "2.11.0", "sideEffects": false, "description": "JBrowse 2 code shared between products but not used by plugins", "keywords": [ @@ -43,7 +43,7 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/core": "^2.10.3", + "@jbrowse/core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "copy-to-clipboard": "^3.3.1", diff --git a/packages/text-indexing/package.json b/packages/text-indexing/package.json index af9c6614fd..71381fd501 100644 --- a/packages/text-indexing/package.json +++ b/packages/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/text-indexing", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 text indexing for desktop", "keywords": [ "jbrowse", diff --git a/packages/web-core/package.json b/packages/web-core/package.json index 2b539cf0e2..2494d3cffc 100644 --- a/packages/web-core/package.json +++ b/packages/web-core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/web-core", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 code shared between web-app type products", "keywords": [ "jbrowse", @@ -42,8 +42,8 @@ }, "dependencies": { "@babel/runtime": "^7.16.3", - "@jbrowse/app-core": "^2.10.3", - "@jbrowse/product-core": "^2.10.3", + "@jbrowse/app-core": "^2.11.0", + "@jbrowse/product-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "clone": "^2.0.0", diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json index b2e89333da..3408e14b44 100644 --- a/plugins/alignments/package.json +++ b/plugins/alignments/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-alignments", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 alignments adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/arc/package.json b/plugins/arc/package.json index 5cbf754ea5..029088852f 100644 --- a/plugins/arc/package.json +++ b/plugins/arc/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-arc", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 arc adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/authentication/package.json b/plugins/authentication/package.json index 3748d000bf..47ad4c581f 100644 --- a/plugins/authentication/package.json +++ b/plugins/authentication/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-authentication", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 Authentication", "keywords": [ "jbrowse", diff --git a/plugins/bed/package.json b/plugins/bed/package.json index 8685e534e2..1e3ad25a21 100644 --- a/plugins/bed/package.json +++ b/plugins/bed/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-bed", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 bed adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json index 2b7a9712d3..b7c57364a7 100644 --- a/plugins/breakpoint-split-view/package.json +++ b/plugins/breakpoint-split-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-breakpoint-split-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 breakpoint detail split view", "keywords": [ "jbrowse", diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json index fe65900afd..4945d1e2e0 100644 --- a/plugins/circular-view/package.json +++ b/plugins/circular-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-circular-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 circular view", "keywords": [ "jbrowse", diff --git a/plugins/comparative-adapters/package.json b/plugins/comparative-adapters/package.json index f5d251e7bf..6c1fd6bfa6 100644 --- a/plugins/comparative-adapters/package.json +++ b/plugins/comparative-adapters/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-comparative-adapters", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 comparative adapters", "keywords": [ "jbrowse", diff --git a/plugins/config/package.json b/plugins/config/package.json index 3a9822baf4..49f053d6f3 100644 --- a/plugins/config/package.json +++ b/plugins/config/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-config", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 config utilities", "keywords": [ "jbrowse", diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json index 5c049c8616..8b255e4576 100644 --- a/plugins/data-management/package.json +++ b/plugins/data-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-data-management", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json index 0f4465e758..fb0a66e1dd 100644 --- a/plugins/dotplot-view/package.json +++ b/plugins/dotplot-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-dotplot-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 dotplot view", "keywords": [ "jbrowse", diff --git a/plugins/gccontent/package.json b/plugins/gccontent/package.json index 983b4a0938..cbbf8395a2 100644 --- a/plugins/gccontent/package.json +++ b/plugins/gccontent/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gccontent", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 gccontent concepts", "keywords": [ "jbrowse", diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json index fa0773bd24..ed1db621da 100644 --- a/plugins/gff3/package.json +++ b/plugins/gff3/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gff3", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 gff3.", "keywords": [ "jbrowse", diff --git a/plugins/grid-bookmark/package.json b/plugins/grid-bookmark/package.json index 26f6cbdb20..279687e083 100644 --- a/plugins/grid-bookmark/package.json +++ b/plugins/grid-bookmark/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-grid-bookmark", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 grid bookmark widget", "keywords": [ "jbrowse", diff --git a/plugins/gtf/package.json b/plugins/gtf/package.json index 191ae3c878..5b272b9659 100644 --- a/plugins/gtf/package.json +++ b/plugins/gtf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gtf", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 gtf feature adapter", "keywords": [ "jbrowse", diff --git a/plugins/hic/package.json b/plugins/hic/package.json index cc0c8d6902..98920257b3 100644 --- a/plugins/hic/package.json +++ b/plugins/hic/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-hic", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 hic adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/jobs-management/package.json b/plugins/jobs-management/package.json index e3d5b41a81..8393bc663a 100644 --- a/plugins/jobs-management/package.json +++ b/plugins/jobs-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-jobs-management", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 jobs management", "keywords": [ "jbrowse", @@ -36,7 +36,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^2.10.3", + "@jbrowse/text-indexing": "^2.11.0", "@mui/icons-material": "^5.0.0" }, "peerDependencies": { diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json index 5ce3fd96ca..e7c5287e81 100644 --- a/plugins/legacy-jbrowse/package.json +++ b/plugins/legacy-jbrowse/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-legacy-jbrowse", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data", "keywords": [ "jbrowse", diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json index 27e78580e3..4d39b9a6f1 100644 --- a/plugins/linear-comparative-view/package.json +++ b/plugins/linear-comparative-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-comparative-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 linear comparative view", "keywords": [ "jbrowse", diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json index 683c563f50..198b9fdd32 100644 --- a/plugins/linear-genome-view/package.json +++ b/plugins/linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-genome-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json index bfa5a7a222..f625e7c197 100644 --- a/plugins/lollipop/package.json +++ b/plugins/lollipop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-lollipop", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 plugin for lollipops", "keywords": [ "jbrowse", diff --git a/plugins/menus/package.json b/plugins/menus/package.json index edcb76dc00..3d5c84e69b 100644 --- a/plugins/menus/package.json +++ b/plugins/menus/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-menus", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 basic menus", "keywords": [ "jbrowse", diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json index c3c40381b2..4bb77e5e0b 100644 --- a/plugins/rdf/package.json +++ b/plugins/rdf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-rdf", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 RDF resources", "keywords": [ "jbrowse", diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json index 982e086efc..1f804d4630 100644 --- a/plugins/sequence/package.json +++ b/plugins/sequence/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sequence", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 sequence adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json index a5c2b158b3..a1e06dcef3 100644 --- a/plugins/spreadsheet-view/package.json +++ b/plugins/spreadsheet-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-spreadsheet-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 spreadsheet view", "keywords": [ "jbrowse", @@ -38,7 +38,7 @@ "dependencies": { "@gmod/bgzf-filehandle": "^1.4.3", "@gmod/vcf": "^5.0.9", - "@jbrowse/plugin-variants": "^2.10.3", + "@jbrowse/plugin-variants": "^2.11.0", "@mui/icons-material": "^5.0.1", "csvtojson": "^2.0.10" }, diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json index ddf0aa38ac..50c96b9165 100644 --- a/plugins/sv-inspector/package.json +++ b/plugins/sv-inspector/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sv-inspector", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 SV inspector view", "keywords": [ "jbrowse", diff --git a/plugins/svg/package.json b/plugins/svg/package.json index 0c1a1e0f4e..3e08754eef 100644 --- a/plugins/svg/package.json +++ b/plugins/svg/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-svg", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 plugin for svg features", "keywords": [ "jbrowse", diff --git a/plugins/text-indexing/package.json b/plugins/text-indexing/package.json index 1cc6b5b261..b6737f8542 100644 --- a/plugins/text-indexing/package.json +++ b/plugins/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-text-indexing", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 text indexing rpc method", "keywords": [ "jbrowse", @@ -36,7 +36,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^2.10.3" + "@jbrowse/text-indexing": "^2.11.0" }, "peerDependencies": { "@jbrowse/core": "^2.0.0", diff --git a/plugins/trix/package.json b/plugins/trix/package.json index 5646326b0e..62a42d23af 100644 --- a/plugins/trix/package.json +++ b/plugins/trix/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-trix", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 trix text search adapter", "keywords": [ "jbrowse", diff --git a/plugins/variants/package.json b/plugins/variants/package.json index 74753a88f8..3ec1db5544 100644 --- a/plugins/variants/package.json +++ b/plugins/variants/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-variants", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 variant adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json index c22ca4bfe7..747a33d2a4 100644 --- a/plugins/wiggle/package.json +++ b/plugins/wiggle/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-wiggle", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 wiggle adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/products/jbrowse-cli/README.md b/products/jbrowse-cli/README.md index 0f2c96c885..f22aa49ec2 100644 --- a/products/jbrowse-cli/README.md +++ b/products/jbrowse-cli/README.md @@ -205,7 +205,7 @@ EXAMPLES ``` _See code: -[src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/add-assembly.ts)_ +[src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/add-assembly.ts)_ ## `jbrowse add-connection CONNECTIONURLORPATH` @@ -256,7 +256,7 @@ EXAMPLES ``` _See code: -[src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/add-connection.ts)_ +[src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/add-connection.ts)_ ## `jbrowse add-track TRACK` @@ -337,7 +337,7 @@ EXAMPLES ``` _See code: -[src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/add-track.ts)_ +[src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/add-track.ts)_ ## `jbrowse add-track-json TRACK` @@ -367,7 +367,7 @@ EXAMPLES ``` _See code: -[src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/add-track-json.ts)_ +[src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/add-track-json.ts)_ ## `jbrowse admin-server` @@ -399,7 +399,7 @@ EXAMPLES ``` _See code: -[src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/admin-server.ts)_ +[src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/admin-server.ts)_ ## `jbrowse create LOCALPATH` @@ -456,7 +456,7 @@ EXAMPLES ``` _See code: -[src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/create.ts)_ +[src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/create.ts)_ ## `jbrowse help [COMMAND]` @@ -507,7 +507,7 @@ EXAMPLES ``` _See code: -[src/commands/make-pif.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/make-pif.ts)_ +[src/commands/make-pif.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/make-pif.ts)_ ## `jbrowse remove-track TRACK` @@ -535,7 +535,7 @@ EXAMPLES ``` _See code: -[src/commands/remove-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/remove-track.ts)_ +[src/commands/remove-track.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/remove-track.ts)_ ## `jbrowse set-default-session` @@ -568,7 +568,7 @@ EXAMPLES ``` _See code: -[src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/set-default-session.ts)_ +[src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/set-default-session.ts)_ ## `jbrowse sort-gff FILE` @@ -599,7 +599,7 @@ EXAMPLES ``` _See code: -[src/commands/sort-gff.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/sort-gff.ts)_ +[src/commands/sort-gff.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/sort-gff.ts)_ ## `jbrowse text-index` @@ -666,7 +666,7 @@ EXAMPLES ``` _See code: -[src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/text-index.ts)_ +[src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/text-index.ts)_ ## `jbrowse upgrade [LOCALPATH]` @@ -729,7 +729,7 @@ EXAMPLES ``` _See code: -[src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v2.10.3/products/jbrowse-cli/src/commands/upgrade.ts)_ +[src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v2.11.0/products/jbrowse-cli/src/commands/upgrade.ts)_ diff --git a/products/jbrowse-cli/package.json b/products/jbrowse-cli/package.json index d37981f1b6..0409fea019 100644 --- a/products/jbrowse-cli/package.json +++ b/products/jbrowse-cli/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/cli", - "version": "2.10.3", + "version": "2.11.0", "description": "A command line tool for working with JBrowse 2", "keywords": [ "jbrowse", diff --git a/products/jbrowse-desktop/package.json b/products/jbrowse-desktop/package.json index 2aa38f0006..de350d6ab4 100644 --- a/products/jbrowse-desktop/package.json +++ b/products/jbrowse-desktop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/desktop", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse desktop application specialized to inspect structural variants", "license": "Apache-2.0", "homepage": "./", @@ -42,40 +42,40 @@ "@emotion/react": "^11.9.0", "@fontsource/roboto": "^5.0.2", "@gmod/faidx": "^1.0.1", - "@jbrowse/app-core": "^2.10.3", - "@jbrowse/core": "^2.10.3", - "@jbrowse/plugin-alignments": "^2.10.3", - "@jbrowse/plugin-arc": "^2.10.3", - "@jbrowse/plugin-authentication": "^2.10.3", - "@jbrowse/plugin-bed": "^2.10.3", - "@jbrowse/plugin-breakpoint-split-view": "^2.10.3", - "@jbrowse/plugin-circular-view": "^2.10.3", - "@jbrowse/plugin-comparative-adapters": "^2.10.3", - "@jbrowse/plugin-config": "^2.10.3", - "@jbrowse/plugin-data-management": "^2.10.3", - "@jbrowse/plugin-dotplot-view": "^2.10.3", - "@jbrowse/plugin-gccontent": "^2.10.3", - "@jbrowse/plugin-gff3": "^2.10.3", - "@jbrowse/plugin-grid-bookmark": "^2.10.3", - "@jbrowse/plugin-gtf": "^2.10.3", - "@jbrowse/plugin-hic": "^2.10.3", - "@jbrowse/plugin-jobs-management": "^2.10.3", - "@jbrowse/plugin-legacy-jbrowse": "^2.10.3", - "@jbrowse/plugin-linear-comparative-view": "^2.10.3", - "@jbrowse/plugin-linear-genome-view": "^2.10.3", - "@jbrowse/plugin-lollipop": "^2.10.3", - "@jbrowse/plugin-menus": "^2.10.3", - "@jbrowse/plugin-rdf": "^2.10.3", - "@jbrowse/plugin-sequence": "^2.10.3", - "@jbrowse/plugin-spreadsheet-view": "^2.10.3", - "@jbrowse/plugin-sv-inspector": "^2.10.3", - "@jbrowse/plugin-svg": "^2.10.3", - "@jbrowse/plugin-text-indexing": "^2.10.3", - "@jbrowse/plugin-trix": "^2.10.3", - "@jbrowse/plugin-variants": "^2.10.3", - "@jbrowse/plugin-wiggle": "^2.10.3", - "@jbrowse/product-core": "^2.10.3", - "@jbrowse/text-indexing": "^2.10.3", + "@jbrowse/app-core": "^2.11.0", + "@jbrowse/core": "^2.11.0", + "@jbrowse/plugin-alignments": "^2.11.0", + "@jbrowse/plugin-arc": "^2.11.0", + "@jbrowse/plugin-authentication": "^2.11.0", + "@jbrowse/plugin-bed": "^2.11.0", + "@jbrowse/plugin-breakpoint-split-view": "^2.11.0", + "@jbrowse/plugin-circular-view": "^2.11.0", + "@jbrowse/plugin-comparative-adapters": "^2.11.0", + "@jbrowse/plugin-config": "^2.11.0", + "@jbrowse/plugin-data-management": "^2.11.0", + "@jbrowse/plugin-dotplot-view": "^2.11.0", + "@jbrowse/plugin-gccontent": "^2.11.0", + "@jbrowse/plugin-gff3": "^2.11.0", + "@jbrowse/plugin-grid-bookmark": "^2.11.0", + "@jbrowse/plugin-gtf": "^2.11.0", + "@jbrowse/plugin-hic": "^2.11.0", + "@jbrowse/plugin-jobs-management": "^2.11.0", + "@jbrowse/plugin-legacy-jbrowse": "^2.11.0", + "@jbrowse/plugin-linear-comparative-view": "^2.11.0", + "@jbrowse/plugin-linear-genome-view": "^2.11.0", + "@jbrowse/plugin-lollipop": "^2.11.0", + "@jbrowse/plugin-menus": "^2.11.0", + "@jbrowse/plugin-rdf": "^2.11.0", + "@jbrowse/plugin-sequence": "^2.11.0", + "@jbrowse/plugin-spreadsheet-view": "^2.11.0", + "@jbrowse/plugin-sv-inspector": "^2.11.0", + "@jbrowse/plugin-svg": "^2.11.0", + "@jbrowse/plugin-text-indexing": "^2.11.0", + "@jbrowse/plugin-trix": "^2.11.0", + "@jbrowse/plugin-variants": "^2.11.0", + "@jbrowse/plugin-wiggle": "^2.11.0", + "@jbrowse/product-core": "^2.11.0", + "@jbrowse/text-indexing": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "@mui/x-data-grid": "^7.0.0", diff --git a/products/jbrowse-img/package.json b/products/jbrowse-img/package.json index eb5b21be69..f9798bed94 100644 --- a/products/jbrowse-img/package.json +++ b/products/jbrowse-img/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/img", - "version": "2.10.3", + "version": "2.11.0", "main": "dist/index.js", "module": "esm/index.js", "author": "JBrowse Team", @@ -27,8 +27,8 @@ "@babel/runtime": "^7.17.9", "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", - "@jbrowse/plugin-linear-genome-view": "^2.10.3", - "@jbrowse/react-linear-genome-view": "^2.10.3", + "@jbrowse/plugin-linear-genome-view": "^2.11.0", + "@jbrowse/react-linear-genome-view": "^2.11.0", "canvas": "^2.9.1", "jsdom": "^24.0.0", "mobx": "^6.6.0", diff --git a/products/jbrowse-predefined-sessions/package.json b/products/jbrowse-predefined-sessions/package.json index 2e2e948bb7..33687854dc 100644 --- a/products/jbrowse-predefined-sessions/package.json +++ b/products/jbrowse-predefined-sessions/package.json @@ -1,6 +1,6 @@ { "name": "jbrowse-predefined-sessions", - "version": "2.10.3", + "version": "2.11.0", "main": "index.js", "author": "JBrowse Team", "license": "MIT", diff --git a/products/jbrowse-react-app/package.json b/products/jbrowse-react-app/package.json index 9b2b5c8546..df3a3360a5 100644 --- a/products/jbrowse-react-app/package.json +++ b/products/jbrowse-react-app/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-app", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 app React component", "keywords": [ "jbrowse", @@ -48,38 +48,38 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/app-core": "^2.10.3", - "@jbrowse/core": "^2.10.3", - "@jbrowse/plugin-alignments": "^2.10.3", - "@jbrowse/plugin-arc": "^2.10.3", - "@jbrowse/plugin-authentication": "^2.10.3", - "@jbrowse/plugin-bed": "^2.10.3", - "@jbrowse/plugin-breakpoint-split-view": "^2.10.3", - "@jbrowse/plugin-circular-view": "^2.10.3", - "@jbrowse/plugin-comparative-adapters": "^2.10.3", - "@jbrowse/plugin-config": "^2.10.3", - "@jbrowse/plugin-data-management": "^2.10.3", - "@jbrowse/plugin-dotplot-view": "^2.10.3", - "@jbrowse/plugin-gccontent": "^2.10.3", - "@jbrowse/plugin-gff3": "^2.10.3", - "@jbrowse/plugin-grid-bookmark": "^2.10.3", - "@jbrowse/plugin-gtf": "^2.10.3", - "@jbrowse/plugin-hic": "^2.10.3", - "@jbrowse/plugin-legacy-jbrowse": "^2.10.3", - "@jbrowse/plugin-linear-comparative-view": "^2.10.3", - "@jbrowse/plugin-linear-genome-view": "^2.10.3", - "@jbrowse/plugin-lollipop": "^2.10.3", - "@jbrowse/plugin-menus": "^2.10.3", - "@jbrowse/plugin-rdf": "^2.10.3", - "@jbrowse/plugin-sequence": "^2.10.3", - "@jbrowse/plugin-spreadsheet-view": "^2.10.3", - "@jbrowse/plugin-sv-inspector": "^2.10.3", - "@jbrowse/plugin-svg": "^2.10.3", - "@jbrowse/plugin-trix": "^2.10.3", - "@jbrowse/plugin-variants": "^2.10.3", - "@jbrowse/plugin-wiggle": "^2.10.3", - "@jbrowse/product-core": "^2.10.3", - "@jbrowse/web-core": "^2.10.3", + "@jbrowse/app-core": "^2.11.0", + "@jbrowse/core": "^2.11.0", + "@jbrowse/plugin-alignments": "^2.11.0", + "@jbrowse/plugin-arc": "^2.11.0", + "@jbrowse/plugin-authentication": "^2.11.0", + "@jbrowse/plugin-bed": "^2.11.0", + "@jbrowse/plugin-breakpoint-split-view": "^2.11.0", + "@jbrowse/plugin-circular-view": "^2.11.0", + "@jbrowse/plugin-comparative-adapters": "^2.11.0", + "@jbrowse/plugin-config": "^2.11.0", + "@jbrowse/plugin-data-management": "^2.11.0", + "@jbrowse/plugin-dotplot-view": "^2.11.0", + "@jbrowse/plugin-gccontent": "^2.11.0", + "@jbrowse/plugin-gff3": "^2.11.0", + "@jbrowse/plugin-grid-bookmark": "^2.11.0", + "@jbrowse/plugin-gtf": "^2.11.0", + "@jbrowse/plugin-hic": "^2.11.0", + "@jbrowse/plugin-legacy-jbrowse": "^2.11.0", + "@jbrowse/plugin-linear-comparative-view": "^2.11.0", + "@jbrowse/plugin-linear-genome-view": "^2.11.0", + "@jbrowse/plugin-lollipop": "^2.11.0", + "@jbrowse/plugin-menus": "^2.11.0", + "@jbrowse/plugin-rdf": "^2.11.0", + "@jbrowse/plugin-sequence": "^2.11.0", + "@jbrowse/plugin-spreadsheet-view": "^2.11.0", + "@jbrowse/plugin-sv-inspector": "^2.11.0", + "@jbrowse/plugin-svg": "^2.11.0", + "@jbrowse/plugin-trix": "^2.11.0", + "@jbrowse/plugin-variants": "^2.11.0", + "@jbrowse/plugin-wiggle": "^2.11.0", + "@jbrowse/product-core": "^2.11.0", + "@jbrowse/web-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "@mui/x-data-grid": "^7.0.0", diff --git a/products/jbrowse-react-circular-genome-view/package.json b/products/jbrowse-react-circular-genome-view/package.json index 23c692171d..ce4a3a4723 100644 --- a/products/jbrowse-react-circular-genome-view/package.json +++ b/products/jbrowse-react-circular-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-circular-genome-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 circular genome view React component", "keywords": [ "jbrowse", @@ -41,17 +41,17 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/core": "^2.10.3", - "@jbrowse/embedded-core": "^2.10.3", - "@jbrowse/plugin-authentication": "^2.10.3", - "@jbrowse/plugin-circular-view": "^2.10.3", - "@jbrowse/plugin-config": "^2.10.3", - "@jbrowse/plugin-data-management": "^2.10.3", - "@jbrowse/plugin-linear-genome-view": "^2.10.3", - "@jbrowse/plugin-sequence": "^2.10.3", - "@jbrowse/plugin-variants": "^2.10.3", - "@jbrowse/plugin-wiggle": "^2.10.3", - "@jbrowse/product-core": "^2.10.3", + "@jbrowse/core": "^2.11.0", + "@jbrowse/embedded-core": "^2.11.0", + "@jbrowse/plugin-authentication": "^2.11.0", + "@jbrowse/plugin-circular-view": "^2.11.0", + "@jbrowse/plugin-config": "^2.11.0", + "@jbrowse/plugin-data-management": "^2.11.0", + "@jbrowse/plugin-linear-genome-view": "^2.11.0", + "@jbrowse/plugin-sequence": "^2.11.0", + "@jbrowse/plugin-variants": "^2.11.0", + "@jbrowse/plugin-wiggle": "^2.11.0", + "@jbrowse/product-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "mobx": "^6.6.0", diff --git a/products/jbrowse-react-linear-genome-view/package.json b/products/jbrowse-react-linear-genome-view/package.json index 2a5f7cfda1..f82b989192 100644 --- a/products/jbrowse-react-linear-genome-view/package.json +++ b/products/jbrowse-react-linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-linear-genome-view", - "version": "2.10.3", + "version": "2.11.0", "description": "JBrowse 2 linear genome view React component", "keywords": [ "jbrowse", @@ -48,25 +48,25 @@ "@emotion/cache": "^11.7.1", "@emotion/react": "^11.9.0", "@emotion/styled": "^11.8.1", - "@jbrowse/core": "^2.10.3", - "@jbrowse/embedded-core": "^2.10.3", - "@jbrowse/plugin-alignments": "^2.10.3", - "@jbrowse/plugin-arc": "^2.10.3", - "@jbrowse/plugin-authentication": "^2.10.3", - "@jbrowse/plugin-bed": "^2.10.3", - "@jbrowse/plugin-circular-view": "^2.10.3", - "@jbrowse/plugin-config": "^2.10.3", - "@jbrowse/plugin-data-management": "^2.10.3", - "@jbrowse/plugin-gccontent": "^2.10.3", - "@jbrowse/plugin-gff3": "^2.10.3", - "@jbrowse/plugin-legacy-jbrowse": "^2.10.3", - "@jbrowse/plugin-linear-genome-view": "^2.10.3", - "@jbrowse/plugin-sequence": "^2.10.3", - "@jbrowse/plugin-svg": "^2.10.3", - "@jbrowse/plugin-trix": "^2.10.3", - "@jbrowse/plugin-variants": "^2.10.3", - "@jbrowse/plugin-wiggle": "^2.10.3", - "@jbrowse/product-core": "^2.10.3", + "@jbrowse/core": "^2.11.0", + "@jbrowse/embedded-core": "^2.11.0", + "@jbrowse/plugin-alignments": "^2.11.0", + "@jbrowse/plugin-arc": "^2.11.0", + "@jbrowse/plugin-authentication": "^2.11.0", + "@jbrowse/plugin-bed": "^2.11.0", + "@jbrowse/plugin-circular-view": "^2.11.0", + "@jbrowse/plugin-config": "^2.11.0", + "@jbrowse/plugin-data-management": "^2.11.0", + "@jbrowse/plugin-gccontent": "^2.11.0", + "@jbrowse/plugin-gff3": "^2.11.0", + "@jbrowse/plugin-legacy-jbrowse": "^2.11.0", + "@jbrowse/plugin-linear-genome-view": "^2.11.0", + "@jbrowse/plugin-sequence": "^2.11.0", + "@jbrowse/plugin-svg": "^2.11.0", + "@jbrowse/plugin-trix": "^2.11.0", + "@jbrowse/plugin-variants": "^2.11.0", + "@jbrowse/plugin-wiggle": "^2.11.0", + "@jbrowse/product-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "buffer": "^6.0.3", diff --git a/products/jbrowse-web/package.json b/products/jbrowse-web/package.json index 6beb3afefe..ff18395f94 100644 --- a/products/jbrowse-web/package.json +++ b/products/jbrowse-web/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/web", - "version": "2.10.3", + "version": "2.11.0", "license": "Apache-2.0", "homepage": ".", "main": "build", @@ -15,38 +15,38 @@ }, "dependencies": { "@fontsource/roboto": "^5.0.2", - "@jbrowse/app-core": "^2.10.3", - "@jbrowse/core": "^2.10.3", - "@jbrowse/plugin-alignments": "^2.10.3", - "@jbrowse/plugin-arc": "^2.10.3", - "@jbrowse/plugin-authentication": "^2.10.3", - "@jbrowse/plugin-bed": "^2.10.3", - "@jbrowse/plugin-breakpoint-split-view": "^2.10.3", - "@jbrowse/plugin-circular-view": "^2.10.3", - "@jbrowse/plugin-comparative-adapters": "^2.10.3", - "@jbrowse/plugin-config": "^2.10.3", - "@jbrowse/plugin-data-management": "^2.10.3", - "@jbrowse/plugin-dotplot-view": "^2.10.3", - "@jbrowse/plugin-gccontent": "^2.10.3", - "@jbrowse/plugin-gff3": "^2.10.3", - "@jbrowse/plugin-grid-bookmark": "^2.10.3", - "@jbrowse/plugin-gtf": "^2.10.3", - "@jbrowse/plugin-hic": "^2.10.3", - "@jbrowse/plugin-legacy-jbrowse": "^2.10.3", - "@jbrowse/plugin-linear-comparative-view": "^2.10.3", - "@jbrowse/plugin-linear-genome-view": "^2.10.3", - "@jbrowse/plugin-lollipop": "^2.10.3", - "@jbrowse/plugin-menus": "^2.10.3", - "@jbrowse/plugin-rdf": "^2.10.3", - "@jbrowse/plugin-sequence": "^2.10.3", - "@jbrowse/plugin-spreadsheet-view": "^2.10.3", - "@jbrowse/plugin-sv-inspector": "^2.10.3", - "@jbrowse/plugin-svg": "^2.10.3", - "@jbrowse/plugin-trix": "^2.10.3", - "@jbrowse/plugin-variants": "^2.10.3", - "@jbrowse/plugin-wiggle": "^2.10.3", - "@jbrowse/product-core": "^2.10.3", - "@jbrowse/web-core": "^2.10.3", + "@jbrowse/app-core": "^2.11.0", + "@jbrowse/core": "^2.11.0", + "@jbrowse/plugin-alignments": "^2.11.0", + "@jbrowse/plugin-arc": "^2.11.0", + "@jbrowse/plugin-authentication": "^2.11.0", + "@jbrowse/plugin-bed": "^2.11.0", + "@jbrowse/plugin-breakpoint-split-view": "^2.11.0", + "@jbrowse/plugin-circular-view": "^2.11.0", + "@jbrowse/plugin-comparative-adapters": "^2.11.0", + "@jbrowse/plugin-config": "^2.11.0", + "@jbrowse/plugin-data-management": "^2.11.0", + "@jbrowse/plugin-dotplot-view": "^2.11.0", + "@jbrowse/plugin-gccontent": "^2.11.0", + "@jbrowse/plugin-gff3": "^2.11.0", + "@jbrowse/plugin-grid-bookmark": "^2.11.0", + "@jbrowse/plugin-gtf": "^2.11.0", + "@jbrowse/plugin-hic": "^2.11.0", + "@jbrowse/plugin-legacy-jbrowse": "^2.11.0", + "@jbrowse/plugin-linear-comparative-view": "^2.11.0", + "@jbrowse/plugin-linear-genome-view": "^2.11.0", + "@jbrowse/plugin-lollipop": "^2.11.0", + "@jbrowse/plugin-menus": "^2.11.0", + "@jbrowse/plugin-rdf": "^2.11.0", + "@jbrowse/plugin-sequence": "^2.11.0", + "@jbrowse/plugin-spreadsheet-view": "^2.11.0", + "@jbrowse/plugin-sv-inspector": "^2.11.0", + "@jbrowse/plugin-svg": "^2.11.0", + "@jbrowse/plugin-trix": "^2.11.0", + "@jbrowse/plugin-variants": "^2.11.0", + "@jbrowse/plugin-wiggle": "^2.11.0", + "@jbrowse/product-core": "^2.11.0", + "@jbrowse/web-core": "^2.11.0", "@mui/icons-material": "^5.0.0", "@mui/material": "^5.10.17", "@mui/x-data-grid": "^7.0.0",