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This is the development version of SoilR. It is a rapidly evolving version that may be less stable than the official stable version in CRAN.
- The latest build of the package documentation can be found here:.
- To find examples you can also look at the workflows.
There are several options.
- To install the latest bleeding edge commit without cloning the repository,
you can use the
devtoolspackage. If it is not installed yet type:
install.packages("devtools")After installing devtools, you only need to run
devtools::install_github('MPIBGC-TEE/SoilR/pkg')- Download package file (this might be slightly older) go to the package_builds directory and download the latest SoilR_*.tar.gz file and install it with
devtools::install_local("/path/to/the/downloaded/SoilR\*.tar.gz",repos=NULL)If you do not want to or cannot use devtools you can install the dependencies by copying the contents of the script
install_dependencies.R
- Clone the repository Source possibly change files and install the package either
- directly with devtools
devtools::install('path/to/SoilR/pkg')
- or after building it with
R CMD build path/to/SoilR/pkg
git clone https://github.com/MPIBGC-TEE/SoilR.git
-
If you are already contributing and want to update a vignette or correct a typo in the documentation look at the tools for package maintenance.
-
If you want to contribute new functions or repair bugs, create a pull request.
To learn more about SoilR check the references below, and consult the
workflows
- Sierra, C. A., Müller, M., & Trumbore, S. E. (2014). Modeling radiocarbon dynamics in soils: SoilR version 1.1. Geoscientific Model Development, 7(5), 1919–1931. doi:10.5194/gmd-7-1919-2014
- Sierra, C. A., Müller, M., & Trumbore, S. E. (2012). Models of soil organic matter decomposition: the SoilR package, version 1.0. Geosci. Model Dev., 5(4), 1045–1060. doi:10.5194/gmd-5-1045-2012