{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":15710196,"defaultBranch":"master","name":"seqr","ownerLogin":"broadinstitute","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2014-01-07T16:43:37.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/393552?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1715181140.0","currentOid":""},"activityList":{"items":[{"before":"8a9ac0a1b39d0ca0e3f5d284ba092771106f4459","after":"b6b52cbec274841d9a272ffbfbd42ea9b91096dc","ref":"refs/heads/dev","pushedAt":"2024-05-08T15:22:51.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4072 from broadinstitute/snyk-fix-c842819f096d92b753b334f64cd29a14\n\n[Snyk] Security upgrade cryptography from 42.0.4 to 42.0.6","shortMessageHtmlLink":"Merge pull request #4072 from broadinstitute/snyk-fix-c842819f096d92b…"}},{"before":"cd4860904a2ac95692f87c7a3722b21408ece41c","after":"eb15e423ae077a90f2504a14a3c4249b421704ce","ref":"refs/heads/snyk-fix-c842819f096d92b753b334f64cd29a14","pushedAt":"2024-05-08T15:12:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"fix: requirements.txt to reduce vulnerabilities\n\n\nThe following vulnerabilities are fixed by pinning transitive dependencies:\n- https://snyk.io/vuln/SNYK-PYTHON-CRYPTOGRAPHY-6592767","shortMessageHtmlLink":"fix: requirements.txt to reduce vulnerabilities"}},{"before":null,"after":"cd4860904a2ac95692f87c7a3722b21408ece41c","ref":"refs/heads/snyk-fix-c842819f096d92b753b334f64cd29a14","pushedAt":"2024-05-08T15:12:20.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4040 from broadinstitute/dev\n\nDev","shortMessageHtmlLink":"Merge pull request #4040 from broadinstitute/dev"}},{"before":"a62bc453ccd2de747b3c7b5ebf5290ef159fd1c1","after":"2a52314718d3a7619f1bba1a8a2cb6a911a75354","ref":"refs/heads/tpm-loading-clear-error-message","pushedAt":"2024-05-07T20:24:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"remove unneeded f string","shortMessageHtmlLink":"remove unneeded f string"}},{"before":null,"after":"a62bc453ccd2de747b3c7b5ebf5290ef159fd1c1","ref":"refs/heads/tpm-loading-clear-error-message","pushedAt":"2024-05-07T19:26:28.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"better error handling when rna temp fiel moissing","shortMessageHtmlLink":"better error handling when rna temp fiel moissing"}},{"before":"b2054dfae8c25894a1075f1ae26fed2a2be4cf3a","after":"804407d1405bd75da57e2c524a1c98bfbd5435aa","ref":"refs/heads/compute-guid-cleanup","pushedAt":"2024-05-07T18:11:23.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"update mock sample guids","shortMessageHtmlLink":"update mock sample guids"}},{"before":"bc7dd6929ab2a49f62d23f421cfd83046b22780e","after":"3a512c7a44193c949be4e27500625d7789258789","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-07T16:52:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"fix test","shortMessageHtmlLink":"fix test"}},{"before":"21996c951afe47ef035aa5256d0716e7d78babf0","after":"bc7dd6929ab2a49f62d23f421cfd83046b22780e","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-07T16:41:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"most review comments","shortMessageHtmlLink":"most review comments"}},{"before":null,"after":"b2054dfae8c25894a1075f1ae26fed2a2be4cf3a","ref":"refs/heads/compute-guid-cleanup","pushedAt":"2024-05-07T15:37:26.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"fix syntax","shortMessageHtmlLink":"fix syntax"}},{"before":"7570f67e4e583e56edbfa7f95995c705801669ba","after":"8a9ac0a1b39d0ca0e3f5d284ba092771106f4459","ref":"refs/heads/dev","pushedAt":"2024-05-06T21:18:54.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4070 from broadinstitute/permission-update-variant-transcript\n\nonly show update transcript button to users with edit permission","shortMessageHtmlLink":"Merge pull request #4070 from broadinstitute/permission-update-varian…"}},{"before":"c26f7331d8401a4b2b705442976c7dd6fa8f0de9","after":"f1e97202a12ff5701bffa4c2486839d4304a5c8f","ref":"refs/heads/permission-update-variant-transcript","pushedAt":"2024-05-06T18:45:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"fix unit test","shortMessageHtmlLink":"fix unit test"}},{"before":null,"after":"c26f7331d8401a4b2b705442976c7dd6fa8f0de9","ref":"refs/heads/permission-update-variant-transcript","pushedAt":"2024-05-06T18:39:39.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"only show update transcript button to users with edit permission","shortMessageHtmlLink":"only show update transcript button to users with edit permission"}},{"before":"73774a26b1b48904f07772ac7ebc55c87fc01f07","after":null,"ref":"refs/heads/benb/conditionalize_dataset_version","pushedAt":"2024-05-06T17:09:49.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"bpblanken","name":"Benjamin Blankenmeister","path":"/bpblanken","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5325727?s=80&v=4"}},{"before":"6aa2f5276f4ca3329a7db70342e9e6458eb8147c","after":"7570f67e4e583e56edbfa7f95995c705801669ba","ref":"refs/heads/dev","pushedAt":"2024-05-06T17:09:47.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"bpblanken","name":"Benjamin Blankenmeister","path":"/bpblanken","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5325727?s=80&v=4"},"commit":{"message":"Allow optional \"dataset_version\" in GitHub action. (#4044)\n\n* Conditionalize dataset version\r\n\r\n* Format message correctly\r\n\r\n---------\r\n\r\nCo-authored-by: hanars ","shortMessageHtmlLink":"Allow optional \"dataset_version\" in GitHub action. (#4044)"}},{"before":"04a836ff6eeb59a1390e49116be4e282093b9136","after":"21996c951afe47ef035aa5256d0716e7d78babf0","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-06T15:59:45.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"merge dev","shortMessageHtmlLink":"merge dev"}},{"before":"cceb43caeff642a1eed7335ea99c82e8d7fdc8ec","after":null,"ref":"refs/heads/dependabot/pip/hail_search/aiohttp-3.9.4","pushedAt":"2024-05-06T15:52:56.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"}},{"before":"d91185e39a05fde35f180d2419434d201eab350a","after":"6aa2f5276f4ca3329a7db70342e9e6458eb8147c","ref":"refs/heads/dev","pushedAt":"2024-05-06T15:52:48.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4041 from broadinstitute/dependabot/pip/hail_search/aiohttp-3.9.4\n\nBump aiohttp from 3.9.2 to 3.9.4 in /hail_search","shortMessageHtmlLink":"Merge pull request #4041 from broadinstitute/dependabot/pip/hail_sear…"}},{"before":"26819162ed19c1af338be374683eab928ae8cd9c","after":"d91185e39a05fde35f180d2419434d201eab350a","ref":"refs/heads/dev","pushedAt":"2024-05-06T15:51:39.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4064 from broadinstitute/codacy-fixes-2\n\nCodacy fixes","shortMessageHtmlLink":"Merge pull request #4064 from broadinstitute/codacy-fixes-2"}},{"before":"973d79c76b6d38ee28be88a41a41ff72c4cd2812","after":"04a836ff6eeb59a1390e49116be4e282093b9136","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-06T15:22:07.000Z","pushType":"push","commitsCount":22,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"test notifications","shortMessageHtmlLink":"test notifications"}},{"before":"4f7aa08d1926fa61b4be120321c05d276f1a0990","after":null,"ref":"refs/heads/dependabot/pip/tqdm-4.66.3","pushedAt":"2024-05-03T21:04:56.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"}},{"before":"1a356d79c7dd0981ed51605fb67751267d64ae3e","after":"26819162ed19c1af338be374683eab928ae8cd9c","ref":"refs/heads/dev","pushedAt":"2024-05-03T21:04:54.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4065 from broadinstitute/snyk-fix-96ac524ab2c30218a4c206e0179629f3\n\n[Snyk] Security upgrade tqdm from 4.64.1 to 4.66.3","shortMessageHtmlLink":"Merge pull request #4065 from broadinstitute/snyk-fix-96ac524ab2c3021…"}},{"before":null,"after":"4f7aa08d1926fa61b4be120321c05d276f1a0990","ref":"refs/heads/dependabot/pip/tqdm-4.66.3","pushedAt":"2024-05-03T21:01:42.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"},"commit":{"message":"Bump tqdm from 4.64.1 to 4.66.3\n\nBumps [tqdm](https://github.com/tqdm/tqdm) from 4.64.1 to 4.66.3.\n- [Release notes](https://github.com/tqdm/tqdm/releases)\n- [Commits](https://github.com/tqdm/tqdm/compare/v4.64.1...v4.66.3)\n\n---\nupdated-dependencies:\n- dependency-name: tqdm\n dependency-type: direct:production\n...\n\nSigned-off-by: dependabot[bot] ","shortMessageHtmlLink":"Bump tqdm from 4.64.1 to 4.66.3"}},{"before":"cd4860904a2ac95692f87c7a3722b21408ece41c","after":"e40229cb4f35bfb6bef8771b13044c464686f09f","ref":"refs/heads/snyk-fix-96ac524ab2c30218a4c206e0179629f3","pushedAt":"2024-05-03T20:28:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"fix: requirements.txt to reduce vulnerabilities\n\n\nThe following vulnerabilities are fixed by pinning transitive dependencies:\n- https://snyk.io/vuln/SNYK-PYTHON-TQDM-6807582","shortMessageHtmlLink":"fix: requirements.txt to reduce vulnerabilities"}},{"before":null,"after":"cd4860904a2ac95692f87c7a3722b21408ece41c","ref":"refs/heads/snyk-fix-96ac524ab2c30218a4c206e0179629f3","pushedAt":"2024-05-03T20:28:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"Merge pull request #4040 from broadinstitute/dev\n\nDev","shortMessageHtmlLink":"Merge pull request #4040 from broadinstitute/dev"}},{"before":null,"after":"8634ff985ce7766a419499d365cec56deaec818e","ref":"refs/heads/codacy-fixes-2","pushedAt":"2024-05-03T19:39:36.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"hanars","name":null,"path":"/hanars","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24598672?s=80&v=4"},"commit":{"message":"simplify complex function","shortMessageHtmlLink":"simplify complex function"}},{"before":"829a71959a53e74e3920c31081d35d2f2fca6b3a","after":"973d79c76b6d38ee28be88a41a41ff72c4cd2812","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-03T19:36:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"lint","shortMessageHtmlLink":"lint"}},{"before":"aa0ef6fd2b73ca63e35c1224e30f6a0f4c969c2c","after":"829a71959a53e74e3920c31081d35d2f2fca6b3a","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-03T19:34:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"take out the extras","shortMessageHtmlLink":"take out the extras"}},{"before":"ee480427b85089b7d1cd720a6ba03e5ba86b9595","after":"aa0ef6fd2b73ca63e35c1224e30f6a0f4c969c2c","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-03T19:29:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"a single space","shortMessageHtmlLink":"a single space"}},{"before":"7eac3682f128d0f484303095c398b12e925c4a41","after":"ee480427b85089b7d1cd720a6ba03e5ba86b9595","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-03T19:25:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"a few more","shortMessageHtmlLink":"a few more"}},{"before":"5098013d4d89673d7bc3dd87086f90c1472ae61f","after":"7eac3682f128d0f484303095c398b12e925c4a41","ref":"refs/heads/phenotype-prioritization-notifs","pushedAt":"2024-05-03T19:24:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jklugherz","name":"Julia Klugherz","path":"/jklugherz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25799914?s=80&v=4"},"commit":{"message":"remove created from json response","shortMessageHtmlLink":"remove created from json response"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAERMc6MAA","startCursor":null,"endCursor":null}},"title":"Activity · broadinstitute/seqr"}