Popular repositories

1. rspr rspr Public

   rSPR is a software package for calculating rooted subtree-prune-and-regraft distances and rooted agreement forests.

   C++ 9 7

2. sprspace sprspace Public

   A collection of shell and perl scripts for quantifying MCMC exploration of subtree prune-and-regraft tree space in MrBayes posteriors.

   Perl 6 3

3. uspr uspr Public

   Software for computing the unrooted subtree prune-and-regraft distance between topologies

   C++ 1 3

4. random_spr_walk random_spr_walk Public

   Sample trees from a random walk on the subtree prune-and-regraft (SPR) treespace graph

   C++ 1

5. spr_neighbors spr_neighbors Public

   Find all trees in a given SPR neighborhood

   C++