egonw (Egon Willighagen)

Name
Egon Willighagen
Website/Blog
http://chem-bla-ics.blogspot.com/
Location
Uppsala, Sweden
Member Since
Sep 29, 2008 (about 1 year)

Following 7 coders and watching 60 repositories view all →

Public Repositories (37)

  • bioclipse.rdf

    Bioclipse2 RDF.

    legend

    Last updated Sun Feb 07 13:39:38 -0800 2010

  • bioclipse.metabolomics

    Metabolomics Feature

    legend

    Last updated Sat Feb 06 14:51:08 -0800 2010

  • chembl.rdf

    Scripts to create RDF for ChEMBL.

    legend

    Last updated Sat Feb 06 07:57:07 -0800 2010

  • cdk

    The Chemistry Development Kit

    legend

    Last updated Fri Feb 05 06:19:11 -0800 2010

  • de.ipbhalle.msbi

    IPB-Halle.DE Open Source Metabolomics Software

    legend

    Forked from sneumann/de.ipbhalle.msbi Wed Feb 03 11:15:59 -0800 2010

    Last updated Wed Feb 03 12:14:04 -0800 2010

  • bioclipse.cheminformatics

    Bioclipse2 Cheminformatics.

    legend

    Last updated Wed Feb 03 02:53:26 -0800 2010

  • bioclipse.joelib

    Bioclipse Git Repository for JOELib, http://joelib.sf.net/.

    legend

    Last updated Fri Jan 29 01:42:14 -0800 2010

  • bioclipse.social

    Bioclipse Social - Linking Bioclipse to the Social Web.

    legend

    Last updated Fri Jan 29 01:34:12 -0800 2010

  • egonw.github.com

    Private Homepage

    legend

    Last updated Thu Jan 28 08:37:35 -0800 2010

  • bioclipse.moss

    Bioclipse MOSS feature for cheminformatics substructure mining.

    legend

    Last updated Thu Jan 28 05:37:31 -0800 2010

  • bioclipse.statistics

    Bioclipse2 Statistics.

    legend

    Forked from olas/bioclipse.statistics Wed Jul 15 02:54:25 -0700 2009

    Last updated Wed Dec 16 11:23:15 -0800 2009

  • cdk-taverna

    CDK-Taverna for Taverna 2.x

    legend

    Last updated Thu Dec 10 06:59:36 -0800 2009

  • ojdcheck

    OpenJavaDocCheck

    legend

    Last updated Thu Nov 12 22:56:20 -0800 2009

  • nmrshiftdb-rdf

    RDF interface to the NMRShiftDB data.

    legend

    Last updated Tue Nov 03 01:52:14 -0800 2009

  • blueobelisk.userscript

    Blue Obelisk Userscripts

    legend

    Last updated Sun Nov 01 01:49:07 -0800 2009

  • RobotDF

    Google Wave robot for RDF functionality

    legend

    Last updated Fri Oct 23 13:00:00 -0700 2009

  • cheminfbenchmark

    Cheminformatics Benchmark Toolkit

    legend

    Last updated Tue Oct 13 08:10:10 -0700 2009

  • bioclipse.qsar

    Bioclipse2 QSAR.

    legend

    Forked from olas/bioclipse.qsar Mon Aug 24 09:07:16 -0700 2009

    Last updated Wed Oct 07 06:20:31 -0700 2009

  • bioclipse.sdk

    Bioclipse Software Development Toolkit

    legend

    Last updated Wed Sep 23 23:46:08 -0700 2009

  • bioclipse.drprolog

    Plugin for intregration of DR-PROLOG in Bioclipse

    legend

    Forked from samuell/bioclipse.drprolog Wed Sep 09 11:51:18 -0700 2009

    Last updated Thu Sep 10 15:35:19 -0700 2009

  • bioclipse.medea

    MEDEA functionality in Bioclipse, for massspectroscopy-based structure elucidation.

    legend

    Forked from miguelrojasch/bioclipse.medea Tue Jul 21 07:51:07 -0700 2009

    Last updated Mon Sep 07 03:13:56 -0700 2009

  • CDKitty

    The Chemistry Development Kit Google Wave Robot

    legend

    Last updated Thu Sep 03 07:30:23 -0700 2009

  • java-rdfa

    RDFa Parser for java

    legend

    Forked from shellac/java-rdfa Thu Oct 01 06:56:16 -0700 2009

    Last updated Mon Aug 24 15:13:14 -0700 2009

  • onssolubility

    Open Notebook Science Solubility Project

    legend

    Last updated Thu Aug 20 04:20:10 -0700 2009

  • bioclipse.ds

    Bioclipe2 Decision Support.

    legend

    Forked from olas/bioclipse.ds Wed Jul 15 07:06:58 -0700 2009

    Last updated Wed Aug 19 06:38:59 -0700 2009

  • bioclipse.data

    Bioclipse2 Data: including the Blue Obelisk Structure data set and and older DrugBank version.

    legend

    Forked from olas/bioclipse.data Sat Jul 18 02:37:15 -0700 2009

    Last updated Wed Aug 05 09:09:58 -0700 2009

  • medea_bmc_article

    LaTeX sources for the J. Chem. Inf. article on Medea

    legend

    Forked from steinbeck/medea_bmc_article Tue Jul 21 08:12:26 -0700 2009

    Last updated Tue Jul 21 08:08:44 -0700 2009

  • bioclipse.experimental

    Bioclipse2 Experimental features

    legend

    Forked from olas/bioclipse.experimental Sat Jul 18 02:45:55 -0700 2009

    Last updated Fri Jul 17 13:04:47 -0700 2009

  • biotools

    Simple tools for teaching biology

    legend

    Forked from cniehaus/biotools Thu Jul 09 23:46:35 -0700 2009

    Last updated Sat Jul 04 01:38:48 -0700 2009

  • VFLib

    CDK compatible VF library for substructure and MCS search

    legend

    Forked from asad/VFLib Sat Jul 04 13:25:23 -0700 2009

    Last updated Tue Jun 30 19:07:00 -0700 2009

  • rednael

    IRC bot that propagates Git commit messages.

    legend

    Last updated Mon May 25 03:36:57 -0700 2009

  • pubchem-cdk

    PubChem from a CDK perspective.

    legend

    Last updated Fri May 08 06:17:53 -0700 2009

  • ron

    Tools for rdf.openmolecule.net

    legend

    Last updated Fri May 08 01:50:14 -0700 2009

  • gtd

    Git-based ToDo tool.

    legend

    Last updated Wed Apr 08 01:12:06 -0700 2009

  • jnchem

    Java library to extract data from the Nature Chemistry journal.

    legend

    Last updated Sat Mar 21 01:17:27 -0700 2009

  • xws-taverna

    XWS Plugin for Taverna

    legend

    Last updated Tue Jan 20 01:58:59 -0800 2009

  • knime-chemspider

    Source code for a ChemSpider query API plugin for KNIME.

    legend

    Last updated Mon Dec 01 00:23:34 -0800 2008

Public Activity feed

egonw created gist: 299196 Tue Feb 09 05:27:53 -0800 2010
SELECT DISTINCT ?activity ?compound WHERE { ?protein <http://rdf.farmbio.uu.se/chembl/onto/#ha...
egonw started watching kurtjx/SNORQL Mon Feb 08 00:53:41 -0800 2010
SNORQL's description:
a ajaxy front-end for exploring triple stores
egonw pushed to master at egonw/bioclipse.rdf Sun Feb 07 13:39:38 -0800 2010
HEAD is 148fa80bd0332afa2e382a5c0ec7551e70aa98fa
  • egonw committed 148fa80b:
    Added a Zest-based editor for RDF files, showing a graph visualization of the content. See http://chem-bla-ics.blogspot.com/2010/02/rdf-jena-bioclipse-eclipse-zest-mashups.html
egonw pushed to master at egonw/bioclipse.rdf Sun Feb 07 03:18:06 -0800 2010
HEAD is 871223db5effa239d5cbff466d3ae72e781714ad
  • egonw committed 871223db:
    Revert "Fixed ClassNotFoundException when running Plugin Unit tests on the N3 reader, introduced in commit a2ffc5c2, with the TDB on disk model in the RDF manager"
egonw pushed to master at egonw/bioclipse.rdf Sun Feb 07 03:14:17 -0800 2010
HEAD is b83641b7e8130791df2852d42992da8717433e37

2 commits »

egonw pushed to master at olas/bioclipse.statistics Sun Feb 07 01:40:20 -0800 2010
HEAD is 544ead29cff45ece17d8f51982588b4c343c0f61

11 commits »

egonw pushed to master at egonw/chembl.rdf Sat Feb 06 07:57:07 -0800 2010
HEAD is 497a7de9e5fb0dcb64d658340eb757b533b454b0
  • egonw committed 497a7de9:
    Changed resource URIs to have a proper QName localname; disable InChI output which does not load nicely in Virtuoso 6.1, for reasons I yet do not know
egonw pushed to master at egonw/chembl.rdf Sat Feb 06 02:39:39 -0800 2010
HEAD is d4c29c35479c184a258c41406a344870fb3ca05b
  • egonw committed d4c29c35:
    Updated RDF generation for the assays:
egonw pushed to master at egonw/chembl.rdf Sat Feb 06 01:18:04 -0800 2010
HEAD is f9a732bb4a25546b86f1a8182d9c1f86592c6edd
  • egonw committed f9a732bb:
    Updated RDF generation for the targes:
egonw pushed to master at egonw/chembl.rdf Fri Feb 05 12:51:20 -0800 2010
HEAD is 87d64eb5d8f97d6df6c3d8e21c7483e21c09135a
egonw pushed to master at egonw/chembl.rdf Fri Feb 05 06:33:00 -0800 2010
HEAD is e4ebb93979a7e2f3ac95a92cf4b527d1f1b224d7

2 commits »

egonw pushed to master at egonw/cdk Fri Feb 05 06:19:13 -0800 2010
HEAD is 8eacbfc8a985deffdc19d41b97e52f7aeaaffba4
  • Brian Gilman committed 8eacbfc8:
    Updated to include the float and binary information found in PubChem
egonw created gist: 295746 Fri Feb 05 04:28:26 -0800 2010
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . @prefix rdfs: <http://www.w3.org/200...
egonw pushed to master at egonw/cdk Thu Feb 04 09:08:59 -0800 2010
HEAD is 27109738c66aeb697bffba07bf642c152355f8e5

2 commits »

egonw pushed to master at egonw/bioclipse.rdf Thu Feb 04 09:04:10 -0800 2010
HEAD is a2ffc5c27dbb3986f0ee9b0e09571cca52e7ae86
  • egonw committed a2ffc5c2:
    Added function to create a RDF only TDB store
egonw pushed to master at sneumann/de.ipbhalle.msbi Wed Feb 03 13:03:36 -0800 2010
HEAD is ef9d1d72ff79cdb9b8d23abc0b01eeca142287cd
egonw pushed to master at egonw/de.ipbhalle.msbi Wed Feb 03 12:14:04 -0800 2010
HEAD is 61292ba1194a71b7bda5d5b15fc108db879b42af
  • egonw committed 61292ba1:
    Removed a few backup files from the repository
egonw pushed to master at egonw/de.ipbhalle.msbi Wed Feb 03 12:12:32 -0800 2010
HEAD is ec467af1dd1e0a0702cddf2bb1a1169372d0c8fe
  • egonw committed ec467af1:
    Renamed project, to follow common eclipse plugin patterns
egonw pushed to master at egonw/cdk Wed Feb 03 11:56:34 -0800 2010
HEAD is c4b4c482fa8f7c31597c93d34e4388c437e6b8ea
egonw forked sneumann/de.ipbhalle.msbi Wed Feb 03 11:16:00 -0800 2010
Forked repository is at egonw/de.ipbhalle.msbi
egonw created tag cdk-1.3.2 at egonw/cdk Wed Feb 03 09:06:44 -0800 2010
New tag is at egonw/cdk/tree/cdk-1.3.2
egonw pushed to master at egonw/cdk Wed Feb 03 09:06:39 -0800 2010
HEAD is f7cc552d631954cfcea531cc9a4dc5b88b94e328
egonw pushed to master at egonw/bioclipse.metabolomics Wed Feb 03 03:24:27 -0800 2010
HEAD is ca0be81d3b2ca9c45e36d65a31e6c62c0339de88
egonw pushed to master at egonw/bioclipse.cheminformatics Wed Feb 03 02:53:27 -0800 2010
HEAD is 858d7c8b34f5fb27ccc00507896e01ae0bc1f2fc

5 commits »

egonw pushed to 2.2.x at egonw/bioclipse.cheminformatics Wed Feb 03 02:46:07 -0800 2010
HEAD is 9587f12226c4a687c76426ac7ff1cbffde6f2f97

4 commits »

egonw added sneumann to bioclipse.metabolomics Wed Feb 03 02:29:13 -0800 2010
bioclipse.metabolomics is at egonw/bioclipse.metabolomics
egonw pushed to master at egonw/bioclipse.metabolomics Wed Feb 03 01:39:59 -0800 2010
HEAD is 4103d89c6fd242fc87aaba097b290bef0ffd0232
  • egonw committed 4103d89c:
    Now includes the proper MetFrag plugin
egonw pushed to master at egonw/bioclipse.metabolomics Wed Feb 03 01:36:02 -0800 2010
HEAD is a90170ddb94e7845c47666ffb591e2138590e768
egonw pushed to master at egonw/bioclipse.metabolomics Wed Feb 03 01:33:17 -0800 2010
HEAD is a58c31392e5487c0e82c8eaac1dcb27fb74d7c1a
  • egonw committed a58c3139:
    Added a template for the MetFrag plugin
egonw pushed to master at egonw/cdk Tue Feb 02 03:33:40 -0800 2010
HEAD is b9db6f13a4e2154f43fee0e1c49feec36667c516
  • Stefan Kuhn committed b9db6f13:
    A new test for canonicalLabeler. I first tried in an older checkout, where it failed, but it works in master. I think we can still put the test in, more tests are better.
egonw pushed to master at egonw/cdk Mon Feb 01 14:00:43 -0800 2010
HEAD is b0666e97443a15a3ca56e43bf745c3c8b0d04053
egonw pushed to master at egonw/cdk Mon Feb 01 06:15:57 -0800 2010
HEAD is 68e696a54d379947c5583de304c25add744f43ec

4 commits »

egonw pushed to master at egonw/cdk Mon Feb 01 04:36:42 -0800 2010
HEAD is 0fa73500d9c58f53b3b0f0eeab78dcdbb91a8b0c

4 commits »

egonw pushed to cdk-1.2.x at egonw/cdk Mon Feb 01 02:56:04 -0800 2010
HEAD is 05c857cc4ef013039499bf7326f485c917e593b4
  • Stefan Kuhn committed 05c857cc:
    The IMapping interface had a class comment which probably was a copy&paste artefact. Changed this.
egonw deleted branch 112-moreStefanPatches at egonw/cdk Mon Feb 01 02:54:20 -0800 2010
Deleted branch was at egonw/cdk/tree/112-moreStefanPatches