b9186e1e51ae364e13ab245a088d59888f729724 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/b91277023a522a827d4a78d403d1dbe551052ec8 b91277023a522a827d4a78d403d1dbe551052ec8 2009-08-20T04:19:59-07:00 2009-08-20T04:19:59-07:00 Added missing parameter to documentation 80b78c5279e3b532f263410407b1aa037afab7bf Egon Willighagen egon.willighagen@gmail.com 87482f3c2f82d18592de4c65141bfb3f963f7627 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/b9186e1e51ae364e13ab245a088d59888f729724 b9186e1e51ae364e13ab245a088d59888f729724 2009-08-19T07:08:46-07:00 2009-08-19T07:08:46-07:00 Excluding the SPARQL classes from the build path, as they first need updating for Jena 2.6 1ac26d02016776ff37335bb5444c97135ba7e5d7 Egon Willighagen egon.willighagen@gmail.com b0afc6f23be9818ea0139b67676ba8df8fd0b675 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/87482f3c2f82d18592de4c65141bfb3f963f7627 87482f3c2f82d18592de4c65141bfb3f963f7627 2009-08-19T07:07:40-07:00 2009-08-19T07:07:40-07:00 Updated for Jena 2.6 a431508b17ae9fdc365808f2d93050135e42d5e3 Egon Willighagen egon.willighagen@gmail.com dfc81a611868f9e366d3c3918d3ce8952ce45659 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/b0afc6f23be9818ea0139b67676ba8df8fd0b675 b0afc6f23be9818ea0139b67676ba8df8fd0b675 2009-08-19T07:06:58-07:00 2009-08-19T07:06:58-07:00 Added example to query rdf.openmolecules.net (RON) 067887d453d5b5c494374141d2a111a8c6de5bb3 Egon Willighagen egon.willighagen@gmail.com c058855fc6a5d3c96451f5ef1829a33f8d45dadc Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/dfc81a611868f9e366d3c3918d3ce8952ce45659 dfc81a611868f9e366d3c3918d3ce8952ce45659 2009-08-10T13:25:34-07:00 2009-08-10T13:25:34-07:00 Now save the content actually to file 53252a30e8853a7346f7554546ed6ff85b85182b Egon Willighagen egon.willighagen@gmail.com b235d0b2a94e7ce3f58450bdd47ebd70d208f4eb Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/c058855fc6a5d3c96451f5ef1829a33f8d45dadc c058855fc6a5d3c96451f5ef1829a33f8d45dadc 2009-08-10T08:50:14-07:00 2009-08-10T08:47:24-07:00 Set up a prefs page for Google user name and password 34f9946d21ca54915562aafdbe55c303523c6f06 Egon Willighagen egon.willighagen@gmail.com 028b829a5811db95ebbeddb3db7ab08a0d34a09f Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/b235d0b2a94e7ce3f58450bdd47ebd70d208f4eb b235d0b2a94e7ce3f58450bdd47ebd70d208f4eb 2009-08-10T08:13:54-07:00 2009-08-10T08:13:54-07:00 Removed output to STDOUT 6851cb9574d19087279e1a211e7e2829e97a7094 Egon Willighagen egon.willighagen@gmail.com 6b74ce0e5d6a4ef64024e0dae8ceb6ac56ac809a Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/028b829a5811db95ebbeddb3db7ab08a0d34a09f 028b829a5811db95ebbeddb3db7ab08a0d34a09f 2009-08-10T08:11:38-07:00 2009-08-10T08:11:38-07:00 Updated for minor API changes, allowing it to find the right spreadsheet again 79e9fa068afcf30fc98cc707b35ddb61afe33f08 Egon Willighagen egon.willighagen@gmail.com 5ce9070914f1fd8128c378882af16bac4360187b Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/6b74ce0e5d6a4ef64024e0dae8ceb6ac56ac809a 6b74ce0e5d6a4ef64024e0dae8ceb6ac56ac809a 2009-08-10T08:11:12-07:00 2009-08-10T08:11:12-07:00 Refactored to introduce processData(String username, String password) for use without magic config files e97b08b8d901a8aec5fba7c41564d46eb02f20c1 Egon Willighagen egon.willighagen@gmail.com 47f8422d1855d75211bffae9006577e56d4cd0d8 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/5ce9070914f1fd8128c378882af16bac4360187b 5ce9070914f1fd8128c378882af16bac4360187b 2009-08-10T07:33:49-07:00 2009-08-10T07:33:49-07:00 Added Google Collections e7bd796247edd5e6a3c1afdb4e13d432b97a774d Egon Willighagen egon.willighagen@gmail.com 612f35a1d0ab59c8a24464a87ada97acedc8ea0a Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/47f8422d1855d75211bffae9006577e56d4cd0d8 47f8422d1855d75211bffae9006577e56d4cd0d8 2009-08-10T07:14:26-07:00 2009-08-10T07:14:13-07:00 Added ISolubilityManager.downloadAsRDF() 7e86162098f5e78e7556570e81626adf6725c41a Egon Willighagen egon.willighagen@gmail.com 11fa2764f787a410a07a6659adf88efca7d1e0b6 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/612f35a1d0ab59c8a24464a87ada97acedc8ea0a 612f35a1d0ab59c8a24464a87ada97acedc8ea0a 2009-08-10T07:14:22-07:00 2009-08-10T07:12:11-07:00 Updated GData libs to 1.35 9edb34c861030b23668341c7a3c8b2b2d64da311 Egon Willighagen egon.willighagen@gmail.com 2e3a04e10bf929cf606b986b1615eb0e2aaacd15 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/11fa2764f787a410a07a6659adf88efca7d1e0b6 11fa2764f787a410a07a6659adf88efca7d1e0b6 2009-08-10T05:07:38-07:00 2009-08-10T05:07:38-07:00 Factored out writing the RDF to an OutputStream ae0699293aad5dd70f5b1398e8f31923cd38a7f2 Egon Willighagen egon.willighagen@gmail.com fe4cd5ef9c190d1c144fbc242f69aca92630136c Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/2e3a04e10bf929cf606b986b1615eb0e2aaacd15 2e3a04e10bf929cf606b986b1615eb0e2aaacd15 2009-08-10T05:07:08-07:00 2009-08-10T05:07:08-07:00 Ignore the autogenerated bin/ folders bb12dd1ad06f4c7e2ccf28fc555c77bb5c0d1698 Egon Willighagen egon.willighagen@gmail.com f2646f3d158c388e7c52c16219edc95cdc18d27d Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/fe4cd5ef9c190d1c144fbc242f69aca92630136c fe4cd5ef9c190d1c144fbc242f69aca92630136c 2009-08-10T04:52:20-07:00 2009-08-10T04:52:20-07:00 Integrating stuff into Bioclipse 0f68a66f4603e8093e034caa7e6b1c8012c4ee1f Egon Willighagen egon.willighagen@gmail.com 368e215e3fb33ac511becf2244ee18dd9bada39e Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/f2646f3d158c388e7c52c16219edc95cdc18d27d f2646f3d158c388e7c52c16219edc95cdc18d27d 2009-08-10T03:37:53-07:00 2009-08-10T03:37:53-07:00 Added missing dependency on javax.xml.bind 41e788c4ec8d4c0b70087e45be82764deaacc64e Egon Willighagen egon.willighagen@gmail.com 20166cdf2429f39cc97e0276263e533cf3d3cca5 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/368e215e3fb33ac511becf2244ee18dd9bada39e 368e215e3fb33ac511becf2244ee18dd9bada39e 2009-08-10T01:12:39-07:00 2009-08-10T01:12:39-07:00 Updated to use the bundles used by Bioclipse too cbe1169e05480242dba5776bbb2679679c2711c4 Egon Willighagen egon.willighagen@gmail.com 9759f250415d502088e31d393b49934433ca188a Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/20166cdf2429f39cc97e0276263e533cf3d3cca5 20166cdf2429f39cc97e0276263e533cf3d3cca5 2009-01-12T09:41:40-08:00 2009-01-12T09:41:40-08:00 Use owl:sameAs also for pointing to rdf.openmolecules.net 98d49e29cfc7516ffd00849e6c346db7bc8922ee Egon Willighagen egon.willighagen@gmail.com bd34cac83c4b35748d8dbf6196ae68b846b2fbaf Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/9759f250415d502088e31d393b49934433ca188a 9759f250415d502088e31d393b49934433ca188a 2009-01-12T08:03:41-08:00 2009-01-12T08:03:41-08:00 Added query to query ONS data for DBPedia properties f7c9b8700600ae71f1885a5fe2ed658b1d3e4538 Egon Willighagen egon.willighagen@gmail.com 2a1ef9ac7e626dafa0372d94ec97244f72960784 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/bd34cac83c4b35748d8dbf6196ae68b846b2fbaf bd34cac83c4b35748d8dbf6196ae68b846b2fbaf 2009-01-12T06:52:26-08:00 2009-01-12T06:52:26-08:00 Added links to DBPedia for the solvents, like: <owl:sameAs rdf:resource="http://dbpedia.org/resource/Toluene"/> 22ff3ae5fa6d248613864a01074197bedb352526 Egon Willighagen egon.willighagen@gmail.com 8be6a1c71a198f4cfc794c5d9ee38bb7b756eb4c Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/2a1ef9ac7e626dafa0372d94ec97244f72960784 2a1ef9ac7e626dafa0372d94ec97244f72960784 2008-12-30T13:18:04-08:00 2008-12-30T13:18:04-08:00 Readded the links to rdf.openmolecules.net which got lost earlier b9f9f84127aeaccf2bccf76650e72524ea894054 Egon Willighagen egon.willighagen@gmail.com e48c14a3f172aa87ab1c1f4daec4b3dd497c89d2 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/8be6a1c71a198f4cfc794c5d9ee38bb7b756eb4c 8be6a1c71a198f4cfc794c5d9ee38bb7b756eb4c 2008-12-30T13:05:51-08:00 2008-12-30T13:05:51-08:00 Added code to run SPARQL queries against the RDF from the google spreadsheet: example showing al solubilities for solutes in toluene ea07d705688505f985a5f492de8f21974b0bfe8d Egon Willighagen egon.willighagen@gmail.com 183b12476bbcc8709297f4c7ac30eb678241aa41 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/e48c14a3f172aa87ab1c1f4daec4b3dd497c89d2 e48c14a3f172aa87ab1c1f4daec4b3dd497c89d2 2008-12-30T12:50:13-08:00 2008-12-30T12:50:13-08:00 Moved to output format RDF/XML-ABBREV, because I do not know how to read N3, nor how to force @prefix use in N3 output 0bac7d385eddc9da6e0d4fb453f979e19824d1c2 Egon Willighagen egon.willighagen@gmail.com 9ee329f7eeff82b8dbdd0eb1a8bec0c4eb3713af Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/183b12476bbcc8709297f4c7ac30eb678241aa41 183b12476bbcc8709297f4c7ac30eb678241aa41 2008-12-30T12:37:24-08:00 2008-12-30T12:37:24-08:00 Updated to Jena 2.7.1 and added jars for doing SPARQL queries 563e765147bf707f248bfd7f321e10ba83a2600b Egon Willighagen egon.willighagen@gmail.com d599c4129a242b713f1b4d085240f7bca6bfc80f Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/9ee329f7eeff82b8dbdd0eb1a8bec0c4eb3713af 9ee329f7eeff82b8dbdd0eb1a8bec0c4eb3713af 2008-12-30T08:14:45-08:00 2008-12-30T08:14:45-08:00 Now actually outputs the most important bit too: the solubility, and added the RDF to the GitHub repos, so that other can easily play with the RDF version of the spreadsheet 4ff9072db98392cb0086432e4165773920bfd8ff Egon Willighagen egon.willighagen@gmail.com 0a9cfec610b9460e301fcebdea90890b698e8b80 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/d599c4129a242b713f1b4d085240f7bca6bfc80f d599c4129a242b713f1b4d085240f7bca6bfc80f 2008-12-30T07:51:13-08:00 2008-12-30T07:51:13-08:00 Removed comment: was fixed already 669e57eff6cbf3cdb3bbca3112b6f4bf1e8cbf2c Egon Willighagen egon.willighagen@gmail.com 222ebe72bd046d691d8302e9f0e8d4fe9be27115 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/0a9cfec610b9460e301fcebdea90890b698e8b80 0a9cfec610b9460e301fcebdea90890b698e8b80 2008-12-30T07:49:19-08:00 2008-12-30T07:49:19-08:00 Output the InChI is property too, and for the solvent too 1556ecffb46f384905bbd8fa82da1e4d29c757d9 Egon Willighagen egon.willighagen@gmail.com 089edab7dda04f39b443f48aa08fe9f37190a9e5 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/222ebe72bd046d691d8302e9f0e8d4fe9be27115 222ebe72bd046d691d8302e9f0e8d4fe9be27115 2008-12-30T07:44:28-08:00 2008-12-30T07:44:28-08:00 Added the missing InChI entry from the BO chemblog NS 415cb6f1c2902f24efea3c3eef7253d7fc23ba67 Egon Willighagen egon.willighagen@gmail.com b93e79004ebcb3ba374829a8445ed7e9e89823a5 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/089edab7dda04f39b443f48aa08fe9f37190a9e5 089edab7dda04f39b443f48aa08fe9f37190a9e5 2008-12-30T07:43:01-08:00 2008-12-30T07:43:01-08:00 Be a bit less verbose about what goes wrong 39e5dbbb7ef152a6a90997ae222d9260524a765e Egon Willighagen egon.willighagen@gmail.com e596bcd7632a5458a8b71cba5cd92e3cd38596e3 Egon Willighagen egon.willighagen@gmail.com http://github.com/egonw/onssolubility/commit/b93e79004ebcb3ba374829a8445ed7e9e89823a5 b93e79004ebcb3ba374829a8445ed7e9e89823a5 2008-12-30T07:21:10-08:00 2008-12-30T07:21:10-08:00 Ignore the N3 RDF file a3474437e9b3bdf94a15d5d92c559945a895ed24 Egon Willighagen egon.willighagen@gmail.com