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Popular repositories

  1. stitchr stitchr Public

    Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info

    Python 48 9

  2. TubeStorageTemplates TubeStorageTemplates Public

    Spreadsheet template files for 9x9 and 10x10 tube storage boxes for freezing biological samples

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  3. tcr-analysis tcr-analysis Public

    Scripts and files that I use to analyse T cell receptor repertoire data, produced by deep-sequencing

    Python 6 8

  4. Decombinator Decombinator Public

    Decombinator version 3, for error-correcting analysis of TCR repertoires

    Python 4 12

  5. immunoseq2airr immunoseq2airr Public

    Convert Adaptive Biotech's TCR files into the AIRR Community standard format

    Python 4 2

  6. stitchr-paper-analysis stitchr-paper-analysis Public

    Analysis underlying the manuscript describing Stitchr, the Python tool for generating full-length TCR sequences

    Python 4