============= Documentation, along with tutorials, can be found here.
genda is still very much in development and should not be used by others
genda is a python package that allows the user to import many varieties of genetic data and genda will parse the data, converting it to pandas dataframes. This standardization of data makes it incredibley simple to analyze data from different file formats. genda also has basic analytic tools built into it that allow the user to perform association tests, heirarchical clustering, etc.
Documentation, along with tutorials, can be found here.
python setup.py install
:TODO conda
- [numpy](http://http://www.numpy.org/)
- [pandas](http://pandas.pydata.org/)
- [matplotlib](http://matplotlib.org/)
- [scipy](http://www.scipy.org/)
- [cython](http://www.cython.org/)
- [bx-python](https://bitbucket.org/james_taylor/bx-python/wiki/Home)
- [statsmodels](http://statsmodels.sourceforge.net/)
- [scikit-learn](http://scikit-learn.org/stable/)
- [pysam](https://code.google.com/p/pysam/)