ProPhyle – accurate and resource-frugal phylogeny-based metagenomic classification

Documentation is available at the ProPhyle homepage or can be downloaded as a single archive.

Name		Name	Last commit message	Last commit date
Latest commit History 2,001 Commits
.github/workflows		.github/workflows
bin		bin
docs		docs
prophyle		prophyle
tests		tests
.codecov.yml		.codecov.yml
.coveragerc		.coveragerc
.editorconfig		.editorconfig
.flake8		.flake8
.gitignore		.gitignore
.gitmodules		.gitmodules
.pylintrc		.pylintrc
.pyup.yml		.pyup.yml
.style.yapf		.style.yapf
CODE_OF_CONDUCT.rst		CODE_OF_CONDUCT.rst
CONTRIBUTING.md		CONTRIBUTING.md
LICENSE.txt		LICENSE.txt
MANIFEST.in		MANIFEST.in
Makefile		Makefile
README.rst		README.rst
prophyle.sh		prophyle.sh
requirements.txt		requirements.txt
setup.py		setup.py
test1_index.sh		test1_index.sh
test2_classify.sh		test2_classify.sh
test3_analyze.sh		test3_analyze.sh
trees		trees

prophyle/prophyle