Pinned

1. wiggleplotr wiggleplotr Public

   A small R package to make sequencing read coverage plots in R.

   R 34 19

2. txrevise txrevise Public

   Construct custom transcript annotations for Salmon

   R 3 4

3. eQTL-Catalogue/qtlmap eQTL-Catalogue/qtlmap Public

   Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

   R 40 13

4. eQTL-Catalogue/susie-workflow eQTL-Catalogue/susie-workflow Public archive

   Nextflow workflow for applying SuSiE finemapping model to a large number of molecular QTLs

   R 8 3

5. eQTL-Catalogue/qcnorm eQTL-Catalogue/qcnorm Public

   This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

   Nextflow 6 4

6. eQTL-Catalogue/rnaseq eQTL-Catalogue/rnaseq Public

   RNA-seq quantification pipeline used by the eQTL Catalogue

   Nextflow 4 6