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% Author: David Edgar Liebke (based on Steve Tayon's Clojure cheat sheet)
% Comments, errors, suggestions: liebke(at)googlemail.com
% License
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\begin{document}
\centerline{\Large{\textbf{Incanter Cheat Sheet}}}
\centerline{{\large{\textbf{\textit{Functions and Macros Overview}}}}}
\colouredbox{green}{
\section{Documentation \textmd{\textrm{(http://incanter.org/docs/api)}}}
\cmdline{doc find-doc source \textmd{\textrm{(clojure.contrib.repl-utils)}}}
}
\colouredbox{blue}{
\section{Charts and Plots \textmd{\textrm{(incanter.charts)}}}
\subsection{Common Functions}
\begin{tabularx}{\hsize}{lX}
Appearance:& \cmd{clear-background set-alpha set-background set-title set-x-label set-y-label}\\
View:& \cmd{view}\\
Save PNG:& \cmd{save}\\
\end{tabularx}
\subsection{XY Plots}
\begin{tabularx}{\hsize}{lX}
Create:& \cmd{xy-plot scatter-plot}\\
Add data:& \cmd{add-lines add-points add-function}\\
Annotate:& \cmd{add-points add-polygon, add-text} \\
\end{tabularx}
\subsection{Category Charts}
\begin{tabularx}{\hsize}{lX}
Create:& \cmd{bar-chart line-chart}\\
Add data:& \cmd{add-category}\\
\end{tabularx}
\subsection{Histograms}
\begin{tabularx}{\hsize}{lX}
Create:& \cmd{histogram}\\
Add data:& \cmd{add-histogram add-lines add-function}\\
\end{tabularx}
\subsection{Box Plots}
\begin{tabularx}{\hsize}{lX}
Create:& \cmd{box-plot}\\
Add data:& \cmd{add-box-plot}\\
\end{tabularx}
\subsection{Misc. Plots}
\begin{tabularx}{\hsize}{lX}
Create:& \cmd{qq-plot trace-plot bland-altman-plot}\\
\end{tabularx}
}
\colouredbox{yellow}{
\section{Matrices and Vectors \textmd{\textrm{(incanter.core)}}}
\begin{tabularx}{\hsize}{lX}
Create: & \cmd{matrix diag identity-matrix symmetric-matrix bind-columns bind-rows to-matrix} \\
Properties: & \cmd{dim ncol nrow rank condition matrix?} \\
Selection: & \cmd{sel diag group-by} \\
Element-wise ops: & \cmd{plus minus mult div exp log log10 log2 pow sin cos tan asin acos atan abs} \\
Matrix ops: & \cmd{mmult kronecker solve trace det} \\
Transform: & \cmd{trans vectorize half-vectorize to-list to-vect} \\
Decomp: & \cmd{decomp-cholesky decomp-eigenvalue decomp-lu decomp-qr decomp-svd} \\
View: & \cmd{view} \\
Save to file: & \cmd{save} \\
\end{tabularx}
}
\colouredbox{green}{
\section{I/O \textmd{\textrm{(incanter.io)}}}
\begin{tabularx}{\hsize}{lX}
Read Data: & \cmd{read-dataset} \\
Write Data: & \cmd{save} \\
\end{tabularx}
}
\colouredbox{blue2}{
\section{Optimization \textmd{\textrm{(incanter.optimize)}}}
\cmdline{non-linear-model gradient hessian derivative integrate}
}
\colouredbox{magenta}{
\section{Data Sets \textmd{\textrm{(incanter.core)}}}
\begin{tabularx}{\hsize}{lX}
Create: & \cmd{dataset read-dataset \textmd{\textrm{(incanter.io)}} get-dataset \textmd{\textrm{(incanter.datasets)}}} \\
Properties: & \cmd{dim ncol nrow dataset?} \\
Selection: & \cmd{sel group-by} \\
Transform: & \cmd{to-matrix} \\
View: & \cmd{view} \\
Save to file: & \cmd{save} \\
\end{tabularx}
}
\colouredbox{orange}{
\section{Math \textmd{\textrm{(incanter.core)}}}
% \section{Math}
% \subsection{incanter.core}
\begin{tabularx}{\hsize}{lX}
Basic: & \cmd{plus minus mult div exp log log10 log2 pow sqr sq sum prod abs} \\
Trig: & \cmd{cos sin tan acos asin atan} \\
Special: & \cmd{beta gamma regularized-beta incomplete-beta} \\
Misc.: & \cmd{choose factorial sum-of-squares solve-quadratic} \\
\end{tabularx}
}
\colouredbox{green}{
\section{Probability \textmd{\textrm{(incanter.stats)}}}
\begin{tabularx}{\hsize}{lX}
PDF: & \cmd{pdf-beta pdf-binomial pdf-chisq pdf-exp pdf-f pdf-gamma pdf-neg-binomial pdf-normal pdf-poisson pdf-t pdf-uniform} \\
CDF: & \cmd{cdf-beta cdf-binomial cdf-chisq cdf-empirical cdf-exp cdf-f cdf-gamma cdf-neg-binomial cdf-normal cdf-poisson cdf-t cdf-uniform} \\
Quantile: & \cmd{quantile quantile-normal quantile-t} \\
Sampling: & \cmd{sample sample-beta sample-binomial sample-chisq sample-dirichlet sample-exp sample-gamma sample-inv-wishart sample-mvn sample-neg-binomial sample-normal sample-poisson sample-t sample-uniform sample-wishart} \\
\end{tabularx}
}
\colouredbox{pink}{
\section{Statistics \textmd{\textrm{(incanter.stats)}}}
\begin{tabularx}{\hsize}{lX}
Summary: & \cmd{mean variance sd skewness kurtosis median cumulative-mean tabulate detabulate} \\
Association: & \cmd{covariance correlation} \\
Tests: & \cmd{chisq-test t-test permutations bootstrap} \\
Regression: & \cmd{linear-model} \\
\end{tabularx}
}
\colouredbox{red}{
\section{Bayesian Inference \textmd{\textrm{(incanter.bayes)}}}
\begin{tabularx}{\hsize}{lX}
Sampling: & \cmd{sample-model-params sample-multinomial-params sample-proportions } \\
Plots: & \cmd{trace-plot histogram} \\
\end{tabularx}
}
\colouredbox{yellow}{
\section{Censored Data \textmd{\textrm{(incanter.censored)}}}
\cmdline{censored-mean-lower censored-mean-two-sided censored-mean-upper censored-variance-lower censored-variance-two-sided censored-variance-upper truncated-variance}
}
\begin{flushright}
\footnotesize
\rule{0.7\linewidth}{0.25pt}
\verb!$Revision: 1.1, $Date: October 23, 2009!\\
\verb!David Edgar Liebke (liebke googlemail com)!
\end{flushright}
% history
%
% v1.00
% First version based on API documentation
% http://incanter.org/docs/api
% LaTeX format based on Steve Tayon's Clojure Cheat Sheet
%
% v1.1
% Removed redundancies from Charts and Plots section
\end{document}
