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Fail to install matplotlib by "pip install" on SmartOS(like open solaris system) #6528

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FrankYu opened this issue Jun 2, 2016 · 2 comments
Closed

Fail to install matplotlib by "pip install" on SmartOS(like open solaris system) #6528

FrankYu opened this issue Jun 2, 2016 · 2 comments
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@FrankYu
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FrankYu commented Jun 2, 2016 •
edited by tacaswell 

pip 8.1.2 from /opt/local/lib/python2.7/site-packages (python 2.7)
#python --version
Python 2.7.11

#pip install matplotlib
Collecting matplotlib
  Using cached matplotlib-1.5.1.tar.gz
Requirement already satisfied (use --upgrade to upgrade): numpy>=1.6 in /opt/local/lib/python2.7/site-packages (from matplotlib)
Requirement already satisfied (use --upgrade to upgrade): python-dateutil in /opt/local/lib/python2.7/site-packages (from matplotlib)
Requirement already satisfied (use --upgrade to upgrade): pytz in /opt/local/lib/python2.7/site-packages (from matplotlib)
Requirement already satisfied (use --upgrade to upgrade): cycler in /opt/local/lib/python2.7/site-packages (from matplotlib)
Requirement already satisfied (use --upgrade to upgrade): pyparsing!=2.0.4,>=1.5.6 in /opt/local/lib/python2.7/site-packages (from matplotlib)
Requirement already satisfied (use --upgrade to upgrade): six>=1.5 in /opt/local/lib/python2.7/site-packages (from python-dateutil->matplotlib)
Building wheels for collected packages: matplotlib
  Running setup.py bdist_wheel for matplotlib ... error
  Complete output from command /opt/local/bin/python2.7 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-e9SoSk/matplotlib/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpzh9uDvpip-wheel- --python-tag cp27:
  ============================================================================
  Edit setup.cfg to change the build options

  BUILDING MATPLOTLIB
              matplotlib: yes [1.5.1]
                  python: yes [2.7.11 (default, May  3 2016, 16:18:40)  [GCC
                          4.9.3]]
                platform: yes [sunos5]

  REQUIRED DEPENDENCIES AND EXTENSIONS
                   numpy: yes [version 1.11.0]
                dateutil: yes [using dateutil version 2.5.3]
                    pytz: yes [using pytz version 2016.4]
                  cycler: yes [using cycler version 0.10.0]
                 tornado: yes [tornado was not found. It is required for the
                          WebAgg backend. pip/easy_install may attempt to
                          install it after matplotlib.]
               pyparsing: yes [using pyparsing version 2.1.4]
                  libagg: yes [pkg-config information for 'libagg' could not
                          be found. Using local copy.]
                freetype: yes [version 2.6.2]
                     png: yes [version 1.6.21]
                   qhull: yes [pkg-config information for 'qhull' could not be
                          found. Using local copy.]

  OPTIONAL SUBPACKAGES
             sample_data: yes [installing]
                toolkits: yes [installing]
                   tests: yes [using nose version 1.3.7 / mock is required to
                          run the matplotlib test suite. Please install it
                          with pip or your preferred tool to run the test
                          suite]
          toolkits_tests: yes [using nose version 1.3.7 / mock is required to
                          run the matplotlib test suite. Please install it
                          with pip or your preferred tool to run the test
                          suite]

  OPTIONAL BACKEND EXTENSIONS
                  macosx: no  [Mac OS-X only]
                  qt5agg: no  [PyQt5 not found]
                  qt4agg: no  [PySide not found; PyQt4 not found]
                 gtk3agg: no  [Requires pygobject to be installed.]
               gtk3cairo: no  [Requires cairocffi or pycairo to be installed.]
                  gtkagg: no  [Requires pygtk]
                   tkagg: no  [TKAgg requires Tkinter.]
                   wxagg: no  [requires wxPython]
                     gtk: no  [Requires pygtk]
                     agg: yes [installing]
                   cairo: no  [cairocffi or pycairo not found]
               windowing: no  [Microsoft Windows only]

  OPTIONAL LATEX DEPENDENCIES
                  dvipng: no
             ghostscript: no
                   latex: no
                 pdftops: no

  OPTIONAL PACKAGE DATA
                    dlls: no  [skipping due to configuration]

  running bdist_wheel
  running build
  running build_py
  creating build
  creating build/lib.solaris-2.11-i86pc.64bit-2.7
  copying lib/pylab.py -> build/lib.solaris-2.11-i86pc.64bit-2.7
  creating build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/markers.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/texmanager.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/afm.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/cbook.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/mlab.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/blocking_input.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
  copying lib/matplotlib/patches.py -> build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib
.....
.....
  set build/lib.solaris-2.11-i86pc.64bit-2.7/matplotlib/_version.py to '1.5.1'
  running build_ext
  building 'matplotlib.ft2font' extension
  creating build/temp.solaris-2.11-i86pc.64bit-2.7
  creating build/temp.solaris-2.11-i86pc.64bit-2.7/src
  gcc -fno-strict-aliasing -pipe -O2 -pipe -O2 -DHAVE_DB_185_H -pthread -I/usr/include -I/opt/local/include -I/opt/local/include/db4 -I/opt/local/include/ncurses -DNDEBUG -pipe -O2 -pipe -O2 -DHAVE_DB_185_H -pthread -I/usr/include -I/opt/local/include -I/opt/local/include/db4 -I/opt/local/include/ncurses -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_matplotlib_ft2font_ARRAY_API -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/opt/local/lib/python2.7/site-packages/numpy/core/include -I/opt/local/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include/libpng16 -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/local/include -I. -I/opt/local/include/python2.7 -c src/ft2font.cpp -o build/temp.solaris-2.11-i86pc.64bit-2.7/src/ft2font.o
  gcc -fno-strict-aliasing -pipe -O2 -pipe -O2 -DHAVE_DB_185_H -pthread -I/usr/include -I/opt/local/include -I/opt/local/include/db4 -I/opt/local/include/ncurses -DNDEBUG -pipe -O2 -pipe -O2 -DHAVE_DB_185_H -pthread -I/usr/include -I/opt/local/include -I/opt/local/include/db4 -I/opt/local/include/ncurses -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_matplotlib_ft2font_ARRAY_API -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/opt/local/lib/python2.7/site-packages/numpy/core/include -I/opt/local/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include/libpng16 -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/local/include -I. -I/opt/local/include/python2.7 -c src/ft2font_wrapper.cpp -o build/temp.solaris-2.11-i86pc.64bit-2.7/src/ft2font_wrapper.o
  In file included from /opt/local/include/python2.7/Python.h:44:0,
                   from src/mplutils.h:21,
                   from src/ft2font_wrapper.cpp:1:
  /usr/include/unistd.h:521:75: error: declaration of C function 'void swab(const void*, void*, ssize_t)' conflicts with
  In file included from /opt/local/include/python2.7/Python.h:42:0,
                   from src/mplutils.h:21,
                   from src/ft2font_wrapper.cpp:1:
  /usr/include/stdlib.h:169:13: error: previous declaration 'void swab(const char*, char*, ssize_t)' here
  error: command 'gcc' failed with exit status 1
@tacaswell tacaswell added the Build label Jun 3, 2016
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tacaswell commented Jun 3, 2016 •
edited

You might want to bump this to the SmartOS or cpython mailing lists, it looks like the conflict is between /usr/include/unistd.h and /usr/include/stdlib.h which are both included from Python.h.

Can you build a simple c program that imports includes Python.h on your system?

@FrankYu
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FrankYu commented Jun 4, 2016

@tacaswell
Thanks. I have installed it from https://pkgsrc.joyent.com/packages/SmartOS/2016Q1/x86_64/All/.

@FrankYu FrankYu closed this as completed Jun 4, 2016
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