{"payload":{"pageCount":3,"repositories":[{"type":"Public","name":"pymodulon","owner":"SBRG","isFork":false,"description":"Python package for analyzing and visualizing iModulons","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":3,"issueCount":8,"starsCount":9,"forksCount":10,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-29T22:51:04.597Z"}},{"type":"Public","name":"noncoding_alleleome","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-16T03:15:32.973Z"}},{"type":"Public","name":"iModulonMiner","owner":"SBRG","isFork":true,"description":"Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":3,"starsCount":1,"forksCount":18,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-04T19:10:04.360Z"}},{"type":"Public","name":"GDS-Public","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-13T21:32:57.400Z"}},{"type":"Public","name":"MetPath","owner":"SBRG","isFork":false,"description":"MetPath is a set of functions for performing metabolic pathway-based gene expression analysis using genome-scale metabolic models","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-19T06:21:17.285Z"}},{"type":"Public","name":"precise1k-analyze","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-10T21:42:11.657Z"}},{"type":"Public","name":"modulytics","owner":"SBRG","isFork":false,"description":"Visualization website for the modulome, a cross-species modularization of bacterial transcriptomes","topicNames":[],"topicsNotShown":0,"primaryLanguage":null,"pullRequestCount":1,"issueCount":2,"starsCount":1,"forksCount":3,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-16T01:07:35.387Z"}},{"type":"Public","name":"precise1k","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-29T15:05:55.875Z"}},{"type":"Public","name":"IM-ML","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-11T14:07:18.347Z"}},{"type":"Public","name":"lifelike-website","owner":"SBRG","isFork":false,"description":"Lifelike landing website","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"TypeScript","color":"#3178c6"},"pullRequestCount":10,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-26T20:01:17.447Z"}},{"type":"Public","name":"modulome_pst","owner":"SBRG","isFork":false,"description":"iModulon structure of Pseudomonas syringae pv. tomato DC3000","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-22T04:37:05.058Z"}},{"type":"Public","name":"lifelike-fix-modified-date","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":4,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-06T20:23:04.635Z"}},{"type":"Public","name":"Ecoli_chem_tol_ALE","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-01-06T17:34:47.776Z"}},{"type":"Public","name":"ROS-ALE","owner":"SBRG","isFork":false,"description":"Generates all figures for the manuscript \"Laboratory evolution and advanced data analytics reveal systems biology of ROS tolerance\" by Kevin Rychel, et al.","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-16T21:49:49.542Z"}},{"type":"Public","name":"MASSpy","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":9,"starsCount":23,"forksCount":6,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-09T02:56:31.664Z"}},{"type":"Public","name":"soplex_cython","owner":"SBRG","isFork":false,"description":"Cython bindings to soplex 3.1.1","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":1,"starsCount":1,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-15T08:34:05.948Z"}},{"type":"Public","name":"RiboRid_Design","owner":"SBRG","isFork":false,"description":"Design oligos for RiboRid protocol","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":3,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-12T07:28:36.693Z"}},{"type":"Public","name":"precise2","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":2,"starsCount":2,"forksCount":4,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-03T16:37:30.021Z"}},{"type":"Public","name":"modulome_abaum","owner":"SBRG","isFork":false,"description":"iModulon structure of Acinetobacter baumannii AB5075","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-05-30T07:50:15.322Z"}},{"type":"Public","name":"ME-script","owner":"SBRG","isFork":false,"description":"Notebooks for solving COBRAme models","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-05-08T20:39:31.774Z"}},{"type":"Public","name":"modulome_ppu","owner":"SBRG","isFork":false,"description":"iModulon structure of Pseudomonas putida KT2440","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-28T18:01:21.442Z"}},{"type":"Public","name":"lifelike-keycloak","owner":"SBRG","isFork":false,"description":"Lifelike's custom Keycloak Docker image","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"CSS","color":"#563d7c"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-26T04:57:19.025Z"}},{"type":"Public","name":"dbgwas-network","owner":"SBRG","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-08T22:35:26.430Z"}},{"type":"Public","name":"reference_sequences","owner":"SBRG","isFork":false,"description":"Internal reference sequence bank","topicNames":[],"topicsNotShown":0,"primaryLanguage":null,"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-12-14T01:45:46.528Z"}},{"type":"Public","name":"GDGA_Shortcourse","owner":"SBRG","isFork":false,"description":"Files for the Genome Design/Genome Analytics Short-course organized by the SBRG","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":8,"forksCount":4,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-30T19:04:53.709Z"}},{"type":"Public template","name":"MASS-project","owner":"SBRG","isFork":false,"description":"Template repository for a MASSpy project","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-26T21:54:44.887Z"}},{"type":"Public","name":"ChIPdb","owner":"SBRG","isFork":false,"description":"A Chromatin ImmunoPrecipitation database for PROkaryotic organisms.","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":1,"issueCount":0,"starsCount":3,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-23T14:17:50.476Z"}},{"type":"Public","name":"MASSdb","owner":"SBRG","isFork":false,"description":"Source code for the MASS database project.","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-23T04:19:57.674Z"}},{"type":"Public","name":"modulome_saci","owner":"SBRG","isFork":false,"description":"iModulon structure of Sulfolobus acidocaldarius DSM 639","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-09-20T03:01:49.376Z"}},{"type":"Public","name":"oxidizeme","owner":"SBRG","isFork":false,"description":"OxidizeME model and notebooks","topicNames":[],"topicsNotShown":0,"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":0,"starsCount":2,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-06-11T03:17:21.631Z"}}],"repositoryCount":72,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"mirror","text":"Mirrors"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}