<?xml version="1.0" encoding="UTF-8"?>
<commit>
  <added type="array">
    <added>
      <filename>.gitignore</filename>
    </added>
    <added>
      <filename>LICENSE.txt</filename>
    </added>
    <added>
      <filename>build.xml</filename>
    </added>
    <added>
      <filename>lib/LICENSES.txt</filename>
    </added>
    <added>
      <filename>lib/junit-4.5.jar</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/io/MDLStringKit.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/io/Molecules.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/io/MolfileReader.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/io/MolfileWriter.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/map/DefaultMapper.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/map/DefaultState.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/map/Mapper.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/map/Match.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/map/State.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/Atom.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/AtomicSystem.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/Bond.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/DefaultMolecule.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/Molecule.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/MoleculeKit.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/model/VirtualHydrogenCounter.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/test/AtomTest.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/test/BondTest.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/test/MXTest.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/test/MapperTest.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/test/MoleculeTest.java</filename>
    </added>
    <added>
      <filename>src/com/metamolecular/mx/test/StateTest.java</filename>
    </added>
  </added>
  <modified type="array"/>
  <removed type="array"/>
  <parents type="array"/>
  <author>
    <name>Rich Apodaca</name>
    <email>rapodaca@metamolecular.com</email>
  </author>
  <url>http://github.com/rapodaca/mx/commit/0f90085597d26f683aac6bb000c61164813488fe</url>
  <id>0f90085597d26f683aac6bb000c61164813488fe</id>
  <committed-date>2008-11-23T15:51:25-08:00</committed-date>
  <authored-date>2008-11-23T15:51:25-08:00</authored-date>
  <message>first commit</message>
  <tree>d8afa8bb04416b034a1ff3c3426b6143cb0adfa9</tree>
  <committer>
    <name>Rich Apodaca</name>
    <email>rapodaca@metamolecular.com</email>
  </committer>
</commit>
