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Vaziri Lab at Rockefeller University

Neurotechnology and Biophysics

8 followers
New York City
http://vaziria.com

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MAxiMuM_processing_tools MAxiMuM_processing_tools Public

Pipeline based on NoRMCorre and CaImAn for segmenting large FOV, volumetric Light Bead Microscopy data.

MATLAB 2 1
MesoLF MesoLF Public

Mesoscale volumetric light-field (MesoLF) imaging

MATLAB 4 1
SID SID Public

Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)

MATLAB 26 7
Treadmill_control Treadmill_control Public

Scripts for controlling treadmill and stimuli delivery.

Python 1

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Showing 10 of 13 repositories

scaling_analysis Public
Analysis of the dimensionality of neuronal population dynamics as a function of neuron number

Jupyter Notebook 2 GPL-3.0 0 0 0 Updated Mar 8, 2024
vaziri_dandi Public

Jupyter Notebook 0 0 0 0 Updated Feb 21, 2024
PyBeamProfiler Public
A laser beam profiler app for FLIR cameras

Jupyter Notebook 0 0 0 0 Updated Oct 25, 2023
MesoLF Public
Mesoscale volumetric light-field (MesoLF) imaging

MATLAB 4 1 1 1 Updated May 8, 2023
MAxiMuM_processing_tools Public
Pipeline based on NoRMCorre and CaImAn for segmenting large FOV, volumetric Light Bead Microscopy data.

MATLAB 2 1 0 1 Updated Mar 18, 2023
Treadmill_control Public
Scripts for controlling treadmill and stimuli delivery.

Python 1 0 0 0 Updated May 25, 2021
stytra Public Forked from portugueslab/stytra
A modular package to control stimulation and track behaviour

Python 0 GPL-3.0 27 0 0 Updated Jun 26, 2020
neurolabware_scanbox_utils_docs Public
Collected code, issues and wisdom on the Neurolabware Mesoscope and ScanBox software

MATLAB 0 MIT 0 0 0 Updated Jun 25, 2020
SID Public
Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)

MATLAB 26 7 2 0 Updated Feb 26, 2020
CaImAn Public Forked from flatironinstitute/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Jupyter Notebook 1 GPL-2.0 357 0 0 Updated Feb 20, 2018

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