Required packages: devtools, tidyr, ClusterR, kernlab, plyr, knitr, ggplot2, grid, gridExtra, cowplot, RColorBrewer, ggrepel, superheat, rpart.plot
Instructions:
-
Download the data from http://luigimarchionni.org/divergence.html. Install the required packages.
-
Run install.R script to install the following package from the github repositority: github.com/wikum/divergence
-
Set the DATA_DIR variable in vars.R to the DATA folder containing the data downloaded in step 1
-
Run run_all.R to run experiments and create figures