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@Gabaldonlab

Gabaldon lab

Github repository of Gabaldon lab

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  1. redundans Public

    Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

    C++ 140 20

  2. perSVade Public

    perSVade: personalized Structural Variation detection

    Python 38 5

  3. haplotypo Public

    This is the Haplotypo repository

    Python 20 6

  4. jloh Public

    A tool to extract LOH blocks from VCF, BAM and FASTA data

    Python 21 3

Repositories

Showing 10 of 54 repositories
  • meTAline Public

    WGS pipeline implementation in Snakemake

    Python 1 GPL-3.0 0 5 0 Updated Mar 22, 2025
  • structural_phylome Public

    Compute a sequence and structure based phylome based on uniprot proteomes.

    Python 1 GPL-3.0 1 0 0 Updated Mar 21, 2025
  • Q-PHAST Public
    Python 0 1 0 0 Updated Mar 19, 2025
  • singularity-technical-seminar Public

    Technical seminar on containerizing bioinformatics pipelines 📦 🧬 💻 👩🏻‍💻 🧪

    Python 0 MIT 0 0 0 Updated Mar 4, 2025
  • perSVade Public

    perSVade: personalized Structural Variation detection

    Python 38 GPL-3.0 5 0 0 Updated Feb 26, 2025
  • Cglabrata_tradeoffs Public
    Python 0 0 0 0 Updated Dec 17, 2024
  • ghost_transfers Public Forked from moibernabeu/ghost_transfers
    R 0 2 0 0 Updated Nov 19, 2024
  • phylogenetic-reconstruction-for-hybrids Public
    Python 0 0 0 0 Updated Oct 28, 2024
  • karyon Public

    This is the Karyon Pipeline

    Python 3 GPL-3.0 1 0 0 Updated Sep 13, 2024
  • C_albicans_with_albumin Public
    R 0 0 0 0 Updated Aug 30, 2024
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