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@HMS-IAC

Image Analysis Collaboratory

README.md

Welcome

Welcome to the repository of the Image Analysis Collaboratoy at Harvard Medical School.
Here, you will find code, teaching material, and documentation for public projects.
Please navigate to the list of repositories to see what is available.

Popular repositories Loading

  1. qupath-workshop qupath-workshop Public

    Materials supporting the QuPath workshop at Harvard Medical School.

    3 1

  2. .github .github Public

    About

    2

  3. Bioimage-Analysis-on-O2 Bioimage-Analysis-on-O2 Public

    Documentation page

    HTML 2

  4. BIA-QC BIA-QC Public

    Forked from rkarmaka/BIA-QC

    Quality control for bioimage analysis

    Python 1

  5. stroma-spatial-analysis stroma-spatial-analysis Public

    An image analysis pipeline for quantifying the spatial distribution of cell markers in stroma-rich tumors

    Jupyter Notebook 1

  6. workshop-template workshop-template Public template

    Sphinx template to host workshop materials with versioning support.

Repositories

Showing 10 of 16 repositories
  • diffusion_microscopy Public

    Diffusion models for microscopy image generation

    Python 0 0 0 0 Updated Mar 26, 2025
  • stroma-spatial-analysis-web Public
    Jupyter Notebook 0 1 0 0 Updated Mar 17, 2025
  • quantify_edema Public
    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 14, 2025
  • NoRI Public
    Python 0 1 0 0 Updated Mar 10, 2025
  • image_analysis_pancreatitis Public
    Python 0 MIT 0 0 0 Updated Feb 19, 2025
  • qupath-workshop Public

    Materials supporting the QuPath workshop at Harvard Medical School.

    3 CC-BY-4.0 1 0 0 Updated Feb 10, 2025
  • dashai Public
    Jupyter Notebook 0 0 0 0 Updated Feb 1, 2025
  • fiji-macro-workshop Public

    Materials supporting the Fiji Macro workshop at Harvard Medical School.

    0 CC-BY-4.0 0 0 0 Updated Jan 27, 2025
  • fiji-exercises-collection Public

    This is a collection of exercises for the open-source Fiji software.

    JavaScript 0 1 0 0 Updated Jan 27, 2025
  • fiji-workshop Public

    Materials supporting the ImageJ/Fiji workshop at Harvard Medical School.

    0 CC-BY-4.0 2 0 0 Updated Jan 27, 2025
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