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Menche Lab

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  1. VRNetzer VRNetzer Public

    A Virtual Reality platform for interactive, immersive network exploration.

    35 4

  2. CartoGRAPHs CartoGRAPHs Public

    HTML 23 1

  3. MultiOme MultiOme Public

    Network-based project to explore gene connectivity through biological scales

    HTML 23 5

  4. BioProfiling.jl BioProfiling.jl Public

    A flexible Julia toolkit for high-dimensional cellular profiles

    Julia 13 1

  5. DataDiVR_WebApp DataDiVR_WebApp Public

    JavaScript 10 4

  6. Perturbome Perturbome Public

    Code to reproduce the study: Mapping the perturbome network of cellular perturbations.

    Jupyter Notebook 8 6

Repositories

Showing 10 of 49 repositories
  • netviz-iactive- Public

    PoC & tests for multilayer networks analysis

    Python 1 0 2 0 Updated Apr 23, 2025
  • DataDiVR_WebApp Public
    JavaScript 10 MIT 4 18 0 Updated Apr 18, 2025
  • sctools Public

    Collection of helper functions to make large scale single cell analysis more bearable

    Python 0 MIT 1 0 1 Updated Mar 25, 2025
  • Radhouani_2025_scRNAseq Public

    scRNA-seq analysis for Radhouani et al, Science Immunology, 2025.

    HTML 0 0 0 0 Updated Feb 13, 2025
  • AutoCore Public

    AutoCore code

    Jupyter Notebook 1 0 0 0 Updated Jan 31, 2025
  • datadivr Public

    datadivr toolset

    Python 0 MIT 1 8 0 Updated Jan 24, 2025
  • Radhouani_2025_QuantSeq Public

    QuantSeq analysis from Radhouani et al., 2025, Science Immunology.

    Jupyter Notebook 0 0 0 0 Updated Jan 20, 2025
  • SA_bone_marrow_scRNAseq Public

    scRNA-seq analysis for Radhouani et al, Science Immunology, 2025.

    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2025
  • SA_bone_marrow_QuantSeq Public
    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2025
  • Exposome Public template

    This repository will contain the analyses for the human exposure network paper

    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 30, 2024
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