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Pull requests: nf-core/modules

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Pull requests list

added nf-tests for crisprcleanr/normalize module
#5740 opened Jun 3, 2024 by LeonHornich Loading…
Update minimap2
#5739 opened Jun 3, 2024 by fellen31 • Draft
17 tasks
1
Allow picard/collecthsmetrics to be feeded the same input bed file twice
#5738 opened Jun 2, 2024 by rollf Loading…
3
remove renovate-config-validator updates
#5737 opened Jun 1, 2024 by mashehu Loading…
igvreports: adding tracks and indicies to the input channel
#5736 opened Jun 1, 2024 by cmatKhan Loading…
11
bump bcftools to 1.20
#5730 opened May 31, 2024 by fellen31 • Draft
17 tasks
Adding CircularMapper/realignsamfile
#5728 opened May 31, 2024 by jbv2 • Draft
17 tasks
4
Update LAST modules
#5727 opened May 31, 2024 by charles-plessy Loading…
14 of 17 tasks
2
Handle empty files, remove read group parsing Ready for Review
#5720 opened May 29, 2024 by k1sauce Loading…
1
1
Update deepbgc to use prefix for all files
#5718 opened May 29, 2024 by jfy133 Loading…
17 tasks
3
Update stranger
#5717 opened May 29, 2024 by fellen31 • Draft
17 tasks
Convert ultraplex to nf-test
#5706 opened May 28, 2024 by SPPearce • Draft
nf-test pear module: Cannot get property 'baseName' on null object
#5702 opened May 27, 2024 by LeonHornich Loading…
1
Update interproscan
#5688 opened May 24, 2024 by mahesh-panchal Loading…
14 of 17 tasks
4
Add new module: RTN/TNA new module Adding a new module
#5687 opened May 24, 2024 by mribeirodantas • Draft
1 of 17 tasks
@mribeirodantas
bcftools isec input can be bcf or bcf.gz as well as vcf.gz
#5685 opened May 23, 2024 by RuthEberhardt Loading…
17 tasks
2
sageproteomics/sage
#5677 opened May 22, 2024 by dgemperline-lilly Loading…
10 of 17 tasks
5
First Neuroimaging module : denoising/nlmeans
#5673 opened May 22, 2024 by AlexVCaron Loading…
9 of 17 tasks
1
14
[DRAFT] Add CAT_pack download module
#5668 opened May 22, 2024 by pmoradi2023 Loading…
17 tasks
New module FQ2BAMFAST
#5647 opened May 21, 2024 by mribeirodantas Loading…
9 of 17 tasks
2
Add GMM-Demux
#5641 opened May 21, 2024 by mari-ga Loading…
10 of 17 tasks
48
Add module muse/call and Dockerfile
#5630 opened May 17, 2024 by famosab Loading…
8 of 17 tasks
1
2
Add module muse/sump
#5629 opened May 17, 2024 by famosab Loading…
8 of 17 tasks
1
2
Bump fgbio versions and swap to nftest Ready for Review
#5624 opened May 17, 2024 by SPPearce Loading…
42
[FIX] Make output compression in TCOFFEE/ALIGN more robust
#5609 opened May 15, 2024 by lrauschning Loading…
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