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  • Tsinghua University
  • Beijing, China.
  • X @YBSong4

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Starred repositories

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Rich is a Python library for rich text and beautiful formatting in the terminal.

Python 51,440 1,808 Updated Mar 29, 2025

a JavaScript DNA, RNA, and protein sequence viewer

TypeScript 268 57 Updated Dec 26, 2024

Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval

Python 101 6 Updated Aug 30, 2024

TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact o…

Python 173 23 Updated Jun 20, 2024

An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline

R 63 21 Updated Mar 23, 2025

博客转载项目(将在线的博客转化为markdown格式文件),支持CSDN、博客园、简书以及印象笔记的导出文件

Python 22 7 Updated Aug 21, 2024

Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

Python 257 9 Updated Mar 12, 2025

🆓免费的 ChatGPT 镜像网站列表,持续更新。List of free ChatGPT mirror sites, continuously updated.

Python 19,623 1,364 Updated Mar 27, 2025

Foldseek enables fast and sensitive comparisons of large structure sets.

C 932 117 Updated Mar 18, 2025

Run current & prior versions of R using docker. rocker/r-ver, rocker/rstudio, rocker/shiny, rocker/tidyverse, and so on.

Shell 436 188 Updated Mar 25, 2025

GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools

R 35 4 Updated Mar 25, 2025

Package for fetching metadata and downloading data from SRA/ENA/GEO

Python 325 53 Updated Feb 17, 2025

统计 Git 项目的 commit 时间分布,进而推导出项目的编码工作强度

TypeScript 1,461 56 Updated Feb 17, 2025

Geoms to plot networks with ggplot2

HTML 149 29 Updated Jun 25, 2024

Add zoomed inset panels to your ggplot maps

R 36 Updated Dec 18, 2024

微信小程序开发资源汇总 💯

47,174 8,748 Updated Feb 20, 2025

Convert dataframe to YAML. It supports multi-level hierarchy.

R 3 Updated Jan 26, 2023

Set of icons representing programming languages, designing & development tools

CSS 10,438 2,354 Updated Mar 25, 2025

rrapply: revisiting base-R's rapply

R 55 2 Updated Jan 2, 2025

DEbPeak - Analyze and integrate multi-omics to unravel the regulation of gene expression.

HTML 8 1 Updated Dec 30, 2023

Add tooltips in Shiny apps with hint.css

R 40 1 Updated Apr 8, 2024

Contribute Packages to Bioconductor

136 34 Updated Jan 28, 2025

Area-Proportional Euler and Venn Diagrams with Ellipses

R 131 18 Updated Mar 28, 2024

ggpie - A ggplot2 extension to create pie, donut and rose pie plot

R 48 4 Updated Oct 30, 2023

Visualize and annotate genomic coverage with ggplot2

R 257 21 Updated Jan 24, 2025

Find homologous gene pairs between two species in docker with blast+ (在Docker中使用blast+查找两个物种之间的同源基因对)

Python 1 Updated Mar 28, 2019

程序员在家做饭方法指南。Programmer's guide about how to cook at home (Simplified Chinese only).

Dockerfile 69,999 8,879 Updated Mar 26, 2025

A package to help convert different single-cell data formats to each other

R 416 61 Updated Feb 28, 2024

Differential Count Data Analysis Toolbox

R 61 30 Updated Feb 5, 2024

A list of interesting genome browser and genome visualization programs

TypeScript 928 117 Updated Mar 28, 2025
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