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@survival-lumc

Survival Analysis Group LUMC

A Github site for projects from the Survival Analysis Group at Leiden University Medical Center (LUMC, the Netherlands).

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  1. ValidationCompRisks Public

    Code repository for the manuscript 'Validation of the performance of competing risks prediction models: a guide through modern methods' (2023, BMJ)

    R 25 10

  2. FrailtyTutorial Public

    R-code and output of all analyses in Balan & Putter (2020): A tutorial in frailty models, Statistical Methods in Medical Research, vol. 29(11), 3424-3454, https://journals.sagepub.com/doi/full/10.1…

    HTML 8

  3. Landmarking2.0 Public

    Code for the paper "Landmarking 2.0: Bridging the gap between joint models and landmarking" by Hein Putter & Hans van Houwelingen

    6

  4. FG-TotalFailureProbability Public

    Code and results of Section 4 of the paper "Fine-Gray subdistribution hazard models to simultaneously estimate the absolute risk of different event types: cumulative total failure probability may e…

    R 4

  5. Validation_Under_Interventions Public

    Performance evaluation of predictions under interventions using longitudinal observational data

    R 4 1

  6. DynamicPrediction-book Public

    Code and datasets used in book "Dynamic Prediction in Clinical Survival Analysis" by Hans van Houwelingen and Hein Putter (2011)

    R 6

Repositories

Showing 10 of 18 repositories
  • CausalMultistate Public

    Code accompanying the manuscript "Extending multistate models with g-computation to evaluate treatment delay"

    R 0 0 0 0 Updated Feb 17, 2025
  • CondSurvivalBenefit Public

    R code repository for the paper "Estimating conditional survival benefit for the allocation of scarce resources".

    R 1 BSD-3-Clause 0 0 0 Updated Jan 31, 2025
  • FineGrayCovarMI Public

    Code repository for the manuscript 'Multiple imputation of missing covariates when using the Fine–Gray model' (under review)

    R 2 GPL-3.0 0 0 0 Updated Jan 28, 2025
  • AdvancedSurvival-course Public

    Landing site for course "Advanced Survival Analysis", given in Leiden (the Netherlands).

    CSS 0 0 0 0 Updated Jan 15, 2025
  • CureModels Public
    R 0 0 0 0 Updated Jan 10, 2025
  • AdjCuminc Public

    Performing covariate adjustment on cumulative incidence curves for competing risks data, and comparing various approaches to covariate adjustment via simulation.

    R 1 GPL-3.0 0 0 0 Updated Nov 30, 2024
  • ValidationCompRisks Public

    Code repository for the manuscript 'Validation of the performance of competing risks prediction models: a guide through modern methods' (2023, BMJ)

    R 25 GPL-3.0 10 0 0 Updated Sep 17, 2024
  • FineGrayDGM Public

    Code accompanying the manuscript "Why you should avoid using multiple Fine–Gray models: insights from (attempts at) simulating proportional subdistribution hazards data" (2024, JRSS-A)

    R 2 GPL-3.0 0 0 0 Updated Jun 4, 2024
  • DynamicPrediction-book Public

    Code and datasets used in book "Dynamic Prediction in Clinical Survival Analysis" by Hans van Houwelingen and Hein Putter (2011)

    R 6 0 1 0 Updated Apr 2, 2024
  • Validation_Under_Interventions Public

    Performance evaluation of predictions under interventions using longitudinal observational data

    R 4 1 0 0 Updated Nov 13, 2023
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