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@zellerlab

Zeller Lab

Projects Relating to the Zeller Team's Research of Host-Microbiota Interactions

Popular repositories Loading

  1. GECCO GECCO Public

    GEne Cluster prediction with COnditional random fields.

    Python 67 8

  2. siamcat siamcat Public

    R package for Statistical Inference of Associations between Microbial Communities And host phenoType

    R 52 16

  3. crc_meta crc_meta Public

    Code and analysis results for the CRC shotgun meta-analysis

    R 38 32

  4. cayman cayman Public

    Python 10 4

  5. stag stag Public

    A hierarchical taxonomic classifier for metagenomic sequences

    Python 8 2

  6. siamcat_paper siamcat_paper Public

    Analysis scripts and results presented in the SIAMCAT paper

    R 4 3

Repositories

Showing 10 of 23 repositories
  • cayman Public
    Python 10 MIT 4 2 0 Updated Apr 12, 2025
  • CHAMOIS Public

    Chemical Hierarchy Approximation for secondary Metabolism clusters Obtained In Silico.

    Python 4 GPL-3.0 0 0 0 Updated Apr 1, 2025
  • SIMBA Public

    R package for the simulation of metagenomic samples

    R 2 1 3 0 Updated Mar 31, 2025
  • cayman_paper Public
    R 0 0 0 0 Updated Mar 31, 2025
  • GECCO Public

    GEne Cluster prediction with COnditional random fields.

    Python 67 GPL-3.0 8 7 0 Updated Mar 31, 2025
  • ZellerLab.github.io Public Forked from NBCLab/NBCLab.github.io

    Website for the Zeller Lab

    HTML 1 36 4 0 Updated Mar 18, 2025
  • R 1 GPL-3.0 0 0 0 Updated Feb 10, 2025
  • stag Public

    A hierarchical taxonomic classifier for metagenomic sequences

    Python 8 2 11 1 Updated Nov 30, 2024
  • nevermore Public Forked from cschu/nevermore

    Zeller-group fork of Nevermore

    Nextflow 0 MIT 1 1 0 Updated Nov 8, 2024
  • An-Atlas-of-the-Liver-Cancer-Microbiome Public

    An Atlas of the Liver Cancer Microbiome

    R 1 GPL-3.0 0 0 0 Updated Sep 4, 2024

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