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Editable install reports incorrect version

bugSomething isn't workingSomething isn't working

Status: Open.

#551 In brainglobe/cellfinder;

· matham opened on Jun 23, 2025

[Feature] make cellfinder main functions' arguments keyword-only

enhancementNew feature or requestNew feature or request

Status: Open.

#550 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 23, 2025

Napari saving training data shows done before actually done

bugSomething isn't workingSomething isn't working

Status: Open.

#548 In brainglobe/cellfinder;

· matham opened on Jun 10, 2025

A different tile thresholding strategy for CFOS-type data: can this be its own preprocessing step (local contrast enhancement)

Status: Open.

#541 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 6, 2025

automate evaluation as far as possible, so results can be reported in a standard way at each PR

Status: Open.

#538 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 6, 2025

Benchmarking and validation functionality to evaluate cellfinder, as semi-automated high-level integration tests

Status: Open.

#537 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 6, 2025

Document a list of real-life, diverse(CFOS and rabies-tracing) test datasets that allow us to evaluate correctness and performance of cellfinder

Status: Open.

#536 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 6, 2025

[Feature] Make <code>cellfinder</code> CFOS ready

enhancementNew feature or requestNew feature or request

Status: Open.

#535 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 6, 2025

Improve curation.py::check_training_data_exists()

bugSomething isn't workingSomething isn't working

Status: Open.

#527 In brainglobe/cellfinder;

· alessandrofelder opened on Apr 30, 2025

[Feature] Run cell detection on subvolume of an image and not just select z planes

enhancementNew feature or requestNew feature or request

Status: Open.

#468 In brainglobe/cellfinder;

· IgorTatarnikov opened on Nov 7, 2024

[Feature] expose GPU/CPU choice and other parameters to pytorch cellfinder version

enhancementNew feature or requestNew feature or request

Status: Open.

#464 In brainglobe/cellfinder;

· alessandrofelder opened on Oct 18, 2024

[Feature] an (existing, like ImageJ model zoo - or new) place to share cellfinder models

enhancementNew feature or requestNew feature or request

Status: Open.

#450 In brainglobe/cellfinder;

· alessandrofelder opened on Aug 9, 2024