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BioQueue

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  1. bioqueue.github.io bioqueue.github.io Public

    JavaScript

  2. dependent-packages-backup dependent-packages-backup Public

    Python

  3. tools tools Public

  4. references references Public

  5. cwltool cwltool Public

    Forked from common-workflow-language/cwltool

    Common Workflow Language reference implementation

    Python

  6. ucsc-tools ucsc-tools Public

    Forked from ucscGenomeBrowser/kent

    UCSC Genome Browser source tree. Stable branch: "beta".

    C

Repositories

Showing 10 of 20 repositories
  • samtools Public Forked from samtools/samtools

    Tools (written in C using htslib) for manipulating next-generation sequencing data

    C 0 589 0 0 Updated Nov 28, 2023
  • STAR Public Forked from alexdobin/STAR

    RNA-seq aligner

    C 0 MIT 539 0 0 Updated Nov 13, 2023
  • fastp Public Forked from OpenGene/fastp

    An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

    C++ 0 MIT 337 0 0 Updated Oct 11, 2023
  • bcftools Public Forked from samtools/bcftools

    This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

    C 0 247 0 0 Updated Sep 13, 2023
  • salmon Public Forked from COMBINE-lab/salmon

    🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

    C++ 0 GPL-3.0 167 0 0 Updated Aug 23, 2023
  • bowtie2 Public Forked from BenLangmead/bowtie2

    A fast and sensitive gapped read aligner

    C++ 0 GPL-3.0 163 0 0 Updated May 7, 2023
  • sra-tools Public Forked from ncbi/sra-tools

    SRA Tools

    C 0 263 0 0 Updated Mar 24, 2023
  • deepTools Public Forked from deeptools/deepTools

    Tools to process and analyze deep sequencing data.

    Python 0 221 0 0 Updated Mar 24, 2023
  • ucsc-tools Public Forked from ucscGenomeBrowser/kent

    UCSC Genome Browser source tree. Stable branch: "beta".

    C 0 94 0 0 Updated Mar 20, 2023
  • UMI-tools Public Forked from CGATOxford/UMI-tools

    Tools for handling Unique Molecular Identifiers in NGS data sets

    Python 0 MIT 197 0 0 Updated Mar 3, 2023
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