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@CellProfiler

CellProfiler

Software for quantitative analysis of biological images

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  1. CellProfiler Public

    An open-source application for biological image analysis

    Python 970 392

  2. CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    Python 63 70

  3. CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    Python 152 73

  4. tutorials Public

    CellProfiler tutorial pipelines and images

    Jupyter Notebook 93 86

  5. examples Public

    Example CellProfiler pipelines.

    Makefile 14 14

Repositories

Showing 10 of 30 repositories
  • CellProfiler Public

    An open-source application for biological image analysis

    Python 970 392 296 14 Updated Mar 26, 2025
  • tutorials Public

    CellProfiler tutorial pipelines and images

    Jupyter Notebook 93 BSD-3-Clause 86 3 0 Updated Mar 22, 2025
  • centrosome Public

    An open source image processing library

    Python 18 36 30 0 Updated Feb 5, 2025
  • CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    Python 63 70 31 9 Updated Jan 30, 2025
  • core Public

    Core classes and components used by CellProfiler

    Python 6 24 0 0 Updated Nov 12, 2024
  • .github Public

    Default files are stored here, such as code of conduct

    0 0 0 0 Updated Oct 27, 2024
  • distribution Public

    Everything needed to build CellProfiler for your favorite environment.

    Python 4 6 13 0 Updated Sep 26, 2024
  • python-bioformats Public

    Read and write life sciences file formats

    Python 136 47 71 5 Updated Sep 13, 2024
  • python-javabridge Public Forked from LeeKamentsky/python-javabridge

    Python wrapper for the Java Native Interface

    Python 22 65 12 2 Updated Sep 13, 2024
  • CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    Python 152 73 70 5 Updated Aug 16, 2024
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