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@Ensembl

Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 472 157

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 147 26

  3. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 144 120

  4. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 143 63

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 81 77

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 61 29

Repositories

Showing 10 of 211 repositories
  • public-plugins Public

    Plugins for an Ensembl website

    JavaScript 9 Apache-2.0 47 0 0 Updated Mar 14, 2025
  • ensembl-production-imported Public

    Production pipelines used by data-teams to process imported genomes (former EnsemblGenomes pipelines)

    Perl 1 Apache-2.0 4 0 0 Updated Mar 14, 2025
  • ensembl-web-track-api Public

    A Django app for serving the available annotation tracks for Ensembl client.

    Python 1 Apache-2.0 0 0 2 Updated Mar 14, 2025
  • ensembl-analysis Public

    Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines

    Perl 18 Apache-2.0 35 0 0 Updated Mar 14, 2025
  • Perl 1 Apache-2.0 0 2 1 Updated Mar 14, 2025
  • nextflow_modules Public

    A collection of shared Ensembl modules used in NextFlow pipelines

    Nextflow 2 0 0 1 Updated Mar 14, 2025
  • ensembl-variation Public

    The Ensembl Variation Perl API and SQL schema

    Perl 28 Apache-2.0 56 0 10 Updated Mar 14, 2025
  • ensembl-production Public

    Ensembl Production code

    Perl 11 Apache-2.0 43 0 7 Updated Mar 13, 2025
  • ensembl-biomart Public

    Code to build the ensembl and ensembl genomes marts

    Perl 3 8 0 1 Updated Mar 13, 2025
  • ensembl-webcode Public

    The code to run an Ensembl website

    Perl 22 Apache-2.0 51 0 0 Updated Mar 13, 2025

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