-
Notifications
You must be signed in to change notification settings - Fork 60
GRCh37 REST server
Tiago Grego edited this page Dec 20, 2019
·
12 revisions
As the non-human data for GRCh37 is no longer supported from Ensembl Release 100, following endpoints are discontinued from any support:
GET cafe/genetree/id/:id Retrieves a cafe tree of the gene tree using the gene tree stable identifier
GET cafe/genetree/member/id/:id Retrieves the cafe tree of the gene tree that contains the gene / transcript / translation stable identifier
GET cafe/genetree/member/symbol/:species/:symbol Retrieves the cafe tree of the gene tree that contains the gene identified by a symbol
GET family/member/id/:id Retrieves the information for all the families that contains the gene / transcript / translation stable identifier
GET family/member/symbol/:species/:symbol Retrieves the information for all the families that contains the gene identified by a symbol
GET genetree/member/id/:id Retrieves the gene tree that contains the gene / transcript / translation stable identifier
GET genetree/member/symbol/:species/:symbol Retrieves the gene tree that contains the gene identified by a symbol
As the new human assembly GRCh38 has been released, it becomes our new human reference in Ensembl. For those who are still working on GRCh37, we provide a dedicated server for human GRCh37 data.
The data is a snapshot from release 75 in Ensembl. It contains annotation for human on GRCh37.p13 as well as comparative genomics between human and other species from 75.
The software is updated every release, shortly following update of our main REST server.
The server is available here: GRCh37 REST server