DESCRIPTION

Provides profile setup for HAVANA users to access Anacode software.

Currently supplies only bash profile, leaving tcsh users reliant on the legacy and ubiquitous ~/.cshrc

DETAILS

Who is using it?

Consider only havana members,

HAVANA_USERS=$( ypmatch havana aliases ),humpub
SWCFGS=$(  eval ls -1 ~{$HAVANA_USERS}/.softwarerc )
grep -10 anacode $SWCFGS

# missed any?
VERTANNS=$(ypmatch vertann group | cut -d: -f4)
echo $VERTANNS $VERTANNS $HAVANA_USERS | sed -e 's/[, ]/\n/g' | sort | uniq -c | grep -E ' *2 '

With which shell?

ypcat passwd | grep -E "^($( echo $HAVANA_USERS | tr , '|' )):" | \
  cut -d: --output-delimiter="$( printf '\t' )" -f1,7

grep bash $( eval ls -1 ~{$HAVANA_USERS}/.cshrc )

Who doesn't have ~/.softwarerc ?

The problem is that the default (badger, oracle from /etc/csh/sanger/softwarerc ) could well interact with current .cshrc and there is no way we're going to deal with that automatically.

NOSWRC_USERS=$( eval ls -1 ~{$HAVANA_USERS}/.softwarerc 2>&1 >/dev/null | cut -d/ -f7 )
NOSWRC_CSHRC=$( eval ls -1 ~{$( echo $NOSWRC_USERS | tr ' ' ,)}/.cshrc )
tail -n+1 $NOSWRC_CSHRC | less
perl -ne 's/^\s+|[ \t]+$//g; s/\\\n/ CONT /; print unless /^#|^ *$/' $NOSWRC_CSHRC | sort | uniq -c | less

Origin

http://git.internal.sanger.ac.uk/cgi-bin/gitweb.cgi?p=anacode/team_tools.git;a=tree;f=swac-etc probably the master branch.

Ignore files

There are two. One for files that Git ignores, and another for files that rsync ignores.

SEE ALSO

http://mediawiki.internal.sanger.ac.uk/wiki/index.php/Project_software

/etc/bashrc

/etc/csh/sanger/ which comes from CVS and contains dotfiles.