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InSilicoSeq Public
🚀 A sequencing simulator
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bigslice Public
Forked from medema-group/bigsliceA highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
Python GNU Affero General Public License v3.0 UpdatedJan 16, 2024 -
tutorials Public
📚 Various bioinformatics tutorials
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taxadb Public
🐣 locally query the ncbi taxonomy
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wiz Public
takes a metagenome-assembled-genome and does a lot of fancy stuff with it
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedSep 27, 2021 -
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rust-bio Public
Forked from rust-bio/rust-bioThis library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
Rust MIT License UpdatedAug 29, 2020 -
nanoflow Public archive
🔬 De novo assembly of nanopore reads using nextflow
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2019_classifiers_benchmark Public
Benchmarking of metagenomic classifiers
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tools Public
Forked from nf-core/toolsPython package with helper tools for the nf-core community.
Python MIT License UpdatedDec 6, 2019 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedDec 4, 2019 -
git-blog Public
Forked from BrunoGrandePhD/git-noviceSoftware Carpentry introduction to Git for novices.
HTML Other UpdatedNov 6, 2019 -
doctor-tracker Public
A menubar app to be productive and finish your PhD on time
Vue MIT License UpdatedSep 12, 2019 -
KrakenTools Public
Forked from jenniferlu717/KrakenToolsKrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
Python GNU General Public License v3.0 UpdatedAug 7, 2019 -
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staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 25, 2018 -
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modular-code-development Public
Forked from coderefinery/modular-code-developmentModular code development lesson.
HTML UpdatedDec 5, 2018 -
dockerfiles Public
a collection of docker files for bioinformatics --
Dockerfile UpdatedNov 16, 2018 -
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CheckM Public
Forked from Ecogenomics/CheckMAssess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Python GNU General Public License v3.0 UpdatedOct 30, 2018 -
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ohjh-example-notebooks Public
Forked from OpenHumans/ohjh-example-notebooksExplore your personal data with https://notebooks.openhumans.org
Jupyter Notebook MIT License UpdatedMay 11, 2018