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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 937 458

  2. Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 234 75

  3. Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 280 140

  4. Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 32

  5. CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 83 62

  6. PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 191 90

Repositories

Showing 10 of 322 repositories
  • d2e Public

    [Under development] D2E is an end-to-end solution for management of OMOP data

    TypeScript 1 Apache-2.0 0 0 0 Updated Mar 30, 2025
  • Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 32 20 1 Updated Mar 30, 2025
  • PhenotypeLibrary Public

    A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohdsi-phenotype-library-announcements/16910

    R 43 18 5 1 Updated Mar 29, 2025
  • CohortGenerator Public

    Cohort Generation for the OMOP Common Data Model

    R 13 11 22 (1 issue needs help) 4 Updated Mar 29, 2025
  • R 2 Apache-2.0 0 40 3 Updated Mar 29, 2025
  • OmopViewer Public
    R 3 Apache-2.0 0 30 0 Updated Mar 29, 2025
  • PhenotypeR Public
    R 3 Apache-2.0 0 33 1 Updated Mar 29, 2025
  • drat Public

    drat repository for OHDSI R packages

    5 7 0 0 Updated Mar 29, 2025
  • Capr Public

    Cohort definition Application Programming in R

    R 17 Apache-2.0 14 7 2 Updated Mar 29, 2025
  • DatabaseConnector Public

    An R package for connecting to databases using JDBC.

    R 56 86 36 (1 issue needs help) 1 Updated Mar 28, 2025