SACEMA
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- Stellenbosch, South Africa
- http://www.sacema.org
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reinfectionsBelinda
reinfectionsBelinda PublicRepository for Belinda's MSc work on reinfections
R 1
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incidence-synthetic-cohort
incidence-synthetic-cohort PublicPerforms basic HIV incidence Estimation according to the method of Mahiane et al (A general HIV incidence inference scheme based on likelihood of individual level data and a population renewal equa…
R 1
Repositories
- R_est_sa Public
Code for the last steps in the reproduction number (R) estimation pipeline described in https://www.medrxiv.org/content/10.1101/2022.07.22.22277932v1.full
- omicron_reinfections Public
Increased risk of SARS-CoV-2 reinfection associated with emergence of the Omicron variant in South Africa (Pulliam et al. 2021)
- secondWaves Public