DTU Biosustain
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croissance
croissance PublicTool for estimating growth rates from microbial growth curves
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snakemake_UmetaFlow
snakemake_UmetaFlow PublicUntargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
Repositories
- Azure-Seqera-Integrator Public
- bayesian_statistics_for_computational_biology Public archive
A Bayesian statistics course for computational biologists
- Growth-coupling-suite Public
A constraint-based metabolic model-based workflow for computing and analyzing microbial strain designs which couple a target reaction to growth
- snakemake-ont-bacterial-variants Public Forked from MPUSP/snakemake-ont-bacterial-variants
A Snakemake workflow for the identification of variants in bacterial genomes using nanopore long-read sequencing.
- pankb Public
The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.