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@cnr-ibba

CNR-IBBA

Bioinformatic Group @ CNR-IBBA

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  1. SMARTER-database Public

    Smarter database repository

    Jupyter Notebook 1

  2. r-smarter-api Public

    R code to query SMARTER-backend

    R 2

  3. IMAGE-InjectTool Public

    Load IMAGE data into BioSample

    Python 3

  4. dockerfiles Public

    A useful repository for Docker file

    Perl 4 1

  5. shiny-server Public

    Shiny Server @CNR-IBBA

    JavaScript 7 2

  6. BIOINFO-guidelines Public

    Bioinformatic Guidelines @ IBBA-CNR

    3 1

Repositories

Showing 10 of 26 repositories
  • nf-resequencing-mem Public

    Nextflow resequencing pipeline with bwa-mem and freebayes

    Nextflow 0 MIT 0 5 0 Updated Mar 14, 2025
  • nf-configs Public Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    Nextflow 0 MIT 295 0 1 Updated Mar 14, 2025
  • nf-neestimator Public

    A nextflow pipeline for Current Effective Population Size (Ne) calculations with bootstrapping

    Nextflow 0 MIT 0 1 0 Updated Mar 6, 2025
  • BIOINFO-guidelines Public

    Bioinformatic Guidelines @ IBBA-CNR

    3 GPL-3.0 1 2 (1 issue needs help) 1 Updated Feb 27, 2025
  • SMARTER-database Public

    Smarter database repository

    Jupyter Notebook 1 MIT 0 10 3 Updated Oct 16, 2024
  • SMARTER-frontend Public

    SMARTER Database frontend

    TypeScript 0 MIT 0 5 11 Updated Oct 8, 2024
  • nf-treeseq Public

    Nextflow pipeline to convert genotype data into Tree Sequences

    Nextflow 0 MIT 0 7 0 Updated Sep 5, 2024
  • SMARTER-backend Public

    SMARTER Backend API

    Python 0 GPL-3.0 0 7 4 Updated Sep 3, 2024
  • SMARTER-repository Public

    SMARTER Data Repository

    Python 0 0 2 0 Updated Jul 1, 2024
  • r-smarter-api Public

    R code to query SMARTER-backend

    R 2 GPL-3.0 0 2 0 Updated Jun 28, 2024
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