gmboowa
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annotate_variants.py Public
Annotate Variants with Gene Information from a GenBank Reference
Python MIT License UpdatedMar 20, 2025 -
gmboowa.github.io Public template
Forked from mikensubuga/mikensubuga.github.ioMy Personal Website: Publications, Repositories, Projects, Resources, Media
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extract_species_abundance.py Public
Script to extract species abundance from Kraken2 report file
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genomic_pipeline_haploid.sh Public
Comprehensive genomic workflow - reference data retrieval, variant calling, custom database setup, annotation, & missense variant filtering
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extractonlymissenseSNPs- Public
Extract SNPs and counts
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UG sub_lineage mutations drug resistant mutations discovery
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Reference-Based Assembly of Viral Genomes with Host Read Filtering
Shell UpdatedJan 27, 2025 -
pipeline-resources Public
Forked from pha4ge/pipeline-resourcesBioinformatics Pipeline and Visualization resources
Apache License 2.0 UpdatedOct 22, 2024 -
vcf-annotator Public
Forked from rpetit3/vcf-annotatorAdd biological annotations to variants in a given VCF file.
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HIV-DRIVES Public
Forked from MicroBioGenoHub/HIV-DRIVESShell GNU General Public License v3.0 UpdatedSep 27, 2023 -
https-alshedivat.github.io-al-folio- Public
Forked from yuminzhao91/yuminzhao91.github.ioThis is the repository for my personal website. I forked this repository from alshedivat / al-folio and modified the files. You can access my personal website through this link: https://yuminzhao91…
HTML MIT License UpdatedApr 5, 2023 -
rMAP Public
Forked from GunzIvan28/rMAPBacterial analysis toolbox for full ESKAPE pathogen characterisation and profiling the resistome, mobilome, virulome & phylogenomics using WGS
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Kleborate Public
Forked from klebgenomics/KleboratePython GNU General Public License v3.0 UpdatedNov 30, 2018 -
MetaCompare Public
Forked from minoh0201/MetaCompareMetaCompare
Python MIT License UpdatedNov 16, 2018 -
snippy Public
Forked from tseemann/snippy✂️ ⚡ Rapid bacterial SNP calling and core genome alignments