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National Center for Genome Resources

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  1. UMI-analysis UMI-analysis Public

    Scripts for processing Illumina sequence data containing unique molecular identifiers (UMI)

    C 7 1

  2. java java Public

    Various Java apps written at NCGR for a variety of purposes.

    Java 5 3

  3. tapioca tapioca Public

    Tapioca is a pipeline for Illumina Casava 1.8 genome analyzer/hiseq data.

    3 1

  4. quorum quorum Public archive

    A flexible bioinformatics search tool.

    Ruby 2 1

  5. lis_sequence_search lis_sequence_search Public archive

    LIS sequence search

    JavaScript 2

  6. rbpa rbpa Public

    Transcriptome Assembly Pipeline BPA2.1.0

    Shell 2 1

Repositories

Showing 10 of 51 repositories
  • NIGMS-Sandbox-Pangenomics-Module Public
    HTML 0 0 18 0 Updated Apr 17, 2025
  • ncgr-INBRE-Bookdown Public
    TeX 0 0 1 0 Updated Apr 16, 2025
  • Adjudicator Public

    A tool for Adjudicating structural annotation evidence from genome assemblies

    0 Apache-2.0 0 0 0 Updated Apr 11, 2025
  • Cyprinodon Public

    Pilot Project NNMC Cvar, Cbron, Cdes

    HTML 0 0 0 0 Updated Dec 11, 2024
  • DE-Bookdown Public

    Differential Expression Workshop

    HTML 0 0 0 0 Updated Dec 3, 2024
  • Metagenomics-Bookdown Public template
    TeX 0 0 0 0 Updated Nov 8, 2024
  • java Public

    Various Java apps written at NCGR for a variety of purposes.

    Java 5 3 0 0 Updated Aug 25, 2024
  • NISE-bioinformatics Public
    HTML 0 0 0 0 Updated Jul 24, 2024
  • hyena-dna Public Forked from HazyResearch/hyena-dna

    Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

    Assembly 0 Apache-2.0 94 0 0 Updated Jun 15, 2024
  • Coworking Public

    NCGR Coworking Studios

    HTML 0 0 0 0 Updated May 1, 2024
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