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Contains my configuration files

Shell 267 24 Updated Mar 21, 2025

20+ high-performance LLMs with recipes to pretrain, finetune and deploy at scale.

Python 11,841 1,193 Updated Mar 20, 2025

Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

Jupyter Notebook 42,674 5,846 Updated Mar 21, 2025

A 4-hour coding workshop to understand how LLMs are implemented and used

Jupyter Notebook 896 305 Updated Jan 13, 2025

[CCS'24] A dataset consists of 15,140 ChatGPT prompts from Reddit, Discord, websites, and open-source datasets (including 1,405 jailbreak prompts).

Jupyter Notebook 3,020 274 Updated Dec 24, 2024

Generate random test data for bioinformatics

Rust 26 1 Updated Jun 17, 2024

Cutadapt removes adapter sequences from sequencing reads

Python 540 133 Updated Feb 17, 2025

Styled Terminal Markdown Viewer

Python 1,822 105 Updated May 15, 2024

A collection of familiar, friendly, and modern emoji from Microsoft

Python 9,398 522 Updated Jan 30, 2025

Collection of awesome LLM apps with AI Agents and RAG using OpenAI, Anthropic, Gemini and opensource models.

Python 20,172 2,379 Updated Mar 18, 2025

Interpret text data using LLMs (scikit-learn compatible).

Python 163 26 Updated Mar 16, 2025

Tool for plotting sequencing data along genomic coordinates.

Python 259 8 Updated Jan 30, 2025
TeX 53 8 Updated Jun 24, 2020

đź“ś A minimal whiteboard for sketching, annotating and prototyping

JavaScript 18 2 Updated Mar 21, 2025

The minimal and themeable CSS toolkit for flat and clean designs

JavaScript 658 54 Updated Jan 10, 2024

đź”® Micro CSS-inJS library

JavaScript 1 Updated Sep 8, 2024

Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.

Python 25,322 4,566 Updated Aug 18, 2024

JSorolla is a JavaScript Library for biological and genomic data visualization. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/

JavaScript 42 29 Updated Mar 21, 2025

An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company Zetta Genomics. Found a bug or have an idea for a new featur…

Java 169 99 Updated Mar 21, 2025

C++ API & command-line toolkit for working with BAM data

C++ 423 154 Updated Jul 12, 2024

Adapted session for a one-day training

Shell 2 Updated Dec 12, 2019

Code to dump out any Python object to text in a way that aids debugging / useful logging.

Python 19 3 Updated Mar 22, 2022

code for a white paper on our WIki

Shell 2 1 Updated Jan 24, 2017

Scripts to help analysis of NGS data

Perl 3 3 Updated May 3, 2017

R scripts to plot Venn diagrams for 2,3,4-way Venn from counts

R 4 7 Updated Aug 6, 2018
Jupyter Notebook 10,442 17,515 Updated Aug 1, 2024

Official source for spanish Language Models and resources made @ BSC-TEMU within the "Plan de las TecnologĂ­as del Lenguaje" (Plan-TL).

Python 258 21 Updated Jul 27, 2023

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

Cython 813 279 Updated Feb 13, 2025
JavaScript 17 2 Updated Dec 7, 2022

ECCB2020 tutorial: Using Deep Learning For Image and Sequence Analysis

Jupyter Notebook 9 4 Updated Sep 1, 2020
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