Skip to content
#

gisaid-format

Star

Here are 2 public repositories matching this topic...

maximilianh / multiSub

Star 35

Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.

tsv genbank fasta ncbi meta-data ena sars-cov-2 sarscov2 gisaid-uploader gisaid-format gisaid-upload gisaid-xls ncbi-ftp
  • Updated May 1, 2022
  • Python

Improve this page

Add a description, image, and links to the gisaid-format topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the gisaid-format topic, visit your repo's landing page and select "manage topics."

Learn more