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@openworm

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.
README.md

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.

An overview of the core repositories in the project, along with the current status of automated testing, can be found here.

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  1. OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 2.8k 218

  2. openworm.github.io Public

    OpenWorm main website

    HTML 26 36

  3. org.geppetto Public

    Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.

    Python 214 50

  4. c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    Python 120 24

  5. ChannelWorm2 Public

    Tools and curated datasets to build quantitative models of C. elegans ion channels

    Jupyter Notebook 11 2

Repositories

Showing 10 of 104 repositories
  • tracker-commons Public

    Compilation of information and code bases related to open-source trackers for C. elegans

    Scala 12 13 28 (2 issues need help) 4 Updated Apr 23, 2025
  • ConnectomeToolbox Public

    Information on published connectomics data related to C. elegans

    Python 2 4 3 1 Updated Apr 23, 2025
  • openworm.ai Public

    Scripts related to use of LLMs and other AI technology in OpenWorm

    HTML 1 MIT 0 2 0 Updated Apr 23, 2025
  • geppetto-client Public

    The web client of a Geppetto application

    JavaScript 5 2 70 27 Updated Apr 18, 2025
  • c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    Python 120 24 8 (1 issue needs help) 1 Updated Apr 14, 2025
  • CE_locomotion Public Forked from edizquierdo/CE_locomotion

    Neuromechanical model of locomotion in C. elegans, originally developed by Eduardo Izquerdo, Erick Olivares and Randall Beer

    C++ 1 5 7 1 Updated Apr 12, 2025
  • OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 2,807 MIT 218 41 4 Updated Apr 11, 2025
  • org.geppetto.frontend Public

    Geppetto Java frontend bundle

    Java 29 25 2 4 Updated Apr 3, 2025
  • org.geppetto.datasources Public
    Java 2 2 0 5 Updated Mar 28, 2025
  • org.geppetto.core Public

    Geppetto core bundle

    Java 23 11 6 7 Updated Mar 28, 2025
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