Skip to content

Pull requests: nf-core/modules

New pull request New
172 Open 5,744 Closed
172 Open 5,744 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

test: Add stub test to snippy/run
#8151 opened Mar 27, 2025 by delfiterradas • Draft
17 tasks done
1
Add metabuli/build module
#8148 opened Mar 27, 2025 by pawelciurkaardigen Loading…
17 tasks
1
Migrate HLALA_TYPING to nf-test nf-test
#8147 opened Mar 27, 2025 by LouisLeNezet • Draft
17 tasks
1
@LouisLeNezet
5
Metaspace download Ready for Review
#8145 opened Mar 26, 2025 by Dewey-Wang Loading…
9 of 17 tasks
1
@Dewey-Wang
12
add ctatsplicing/prepgenomelib
#8144 opened Mar 26, 2025 by anoronh4 • Draft
17 tasks
🚀 first commit to add ARACNe3 module
#8143 opened Mar 26, 2025 by stikos • Draft
11 of 17 tasks
1
@stikos
1
🤹🏻 subworkflow for protein activity virtual estimation using aracne and viper
#8141 opened Mar 26, 2025 by juanesarango • Draft
7 of 17 tasks
1
add gcta/gsmr tool
#8140 opened Mar 26, 2025 by juliaapolonio Loading…
12 of 17 tasks
6
🚀 Merge new viper module
#8137 opened Mar 26, 2025 by ddomenico • Draft
11 of 17 tasks
1
Subworkflow abundance differential filter fix test
#8134 opened Mar 26, 2025 by sofiromano Loading…
17 tasks done
1
3
nf-test migration: plink/indeppairwise
#8133 opened Mar 26, 2025 by mantisps Loading…
17 tasks
1
12
add module integronfinder
#8131 opened Mar 26, 2025 by nguyent-son Loading…
10 of 17 tasks
9
Update kraken2
#8130 opened Mar 26, 2025 by jaimeozaez Loading…
4 of 17 tasks
@jaimeozaez
Migrate nf-test for Snippy/core nf-test
#8129 opened Mar 26, 2025 by delfiterradas • Draft
14 of 17 tasks
1
@sofiromano @delfiterradas
5
Update clipseq module peka from version 1.0.0 to 1.0.2 draft
#8127 opened Mar 26, 2025 by neusmf Loading…
17 tasks
@CharlotteAnne
1
New module: imagesegmentationmetrics
#8125 opened Mar 26, 2025 by BioinfoTongLI Loading…
12 of 14 tasks
1
Rework FastqScreen enhancement New feature or request nf-test
#8124 opened Mar 26, 2025 by kedhammar • Draft
17 tasks
@Aratz @kedhammar
my code keeps say error, even on the lines i didnt do anything awaiting-feedback will be closed after 30 days
#8122 opened Mar 26, 2025 by LauraGiacM Loading…
1
gatk4/selectvariants: Update documentation and module improvements #7907
#8121 opened Mar 26, 2025 by Alveen-o Loading…
17 tasks
@Alveen-o
Sentieon nftest #7689
#8119 opened Mar 26, 2025 by gpattarone Loading…
17 tasks
MarkDuplicates Input specificity and input refactor.
#8118 opened Mar 26, 2025 by johnoooh Loading…
9 of 17 tasks
6
ADDORREPLACEREADGROUPS and MERGEBAMALIGNMENT input/output file specificity fix.
#8115 opened Mar 26, 2025 by johnoooh Loading…
17 tasks
7
Updated STAR version within the RSEM module (#8108)
#8110 opened Mar 26, 2025 by delagoya Loading…
12 tasks done
1
1
new module starfusion build Ready for Review
#8107 opened Mar 26, 2025 by martings Loading…
17 tasks
@martings @alanmmobbs93
@sofiromano @delfiterradas
9
Add new module mcstaging/macsima2mc for mcmicro
#8101 opened Mar 26, 2025 by EfraMP Loading…
9 of 17 tasks
1
@kubranarci
8
ProTip! no:milestone will show everything without a milestone.