issues Search Results · repo:MDAnalysis/UserGuide language:Python
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inMDAnalysis/UserGuide (press backspace or delete to remove)User story !-- A user story is a description of a feature, from the perspective of the user who desires it. We
appreciate all user stories that as long or short, simple or detailed, as you like! They typically ...
amruthesht
- Opened 4 days ago
- #427
The class was removed in April, now crashing docs building -- it s replaced with TestDumpParserFull.
lilyminium
- Opened on May 9
- #425
On https://userguide.mdanalysis.org/dev/formats/reference/top.html in
The format is defined in PARM parameter/topology file specification. The reader tries to detect if it is a newer
(AMBER 12?) file ...
orbeckst
- 1
- Opened on May 9
- #423
Describe the bug
CI fails in build_docs with
Traceback (most recent call last):
File /home/runner/work/UserGuide/UserGuide/doc/source/scripts/gen_topologyparser_attrs.py , line 29, in module
...
continuous integration
defect
- 1
- Opened on Apr 14
- #422
Description:
As part of the MDAnalysis SDG23 project, we are performing a cleanup and integration of content within the API
documentation. The goal is to differentiate between the API Guide (auto-generated ...
SDG23
namiroues
- Opened on Mar 29
- #417
Describe the bug When following the tutorial in Contributing Code when installing the optional dependencies code
clustwal2.1 /code is not found, and the package code duecredit-0.10.0-pyhd8ed1ab_0 /code ...
defect
developer-docs
FNNunes
- 3
- Opened on Mar 26
- #416
In lock-step with the core library, we can now do a 2.9 release of the userguide once #414 is merged.
IAlibay
- 11
- Opened on Mar 11
- #415
There should be either a way to automatically remove outdated dev versions of the user guide, or we should document how
to manually do it as this should happen post stable release. FWIW the hacky way I ...
- Opened on Mar 10
- #412
As seen in https://github.com/MDAnalysis/UserGuide/actions/runs/13602825962/job/38030801111?pr=406:
AssertionError: assert [+ received] == [- snapshot]
list([
...
aromaticity ,
- ...
- Opened on Mar 1
- #407
Describe the bug https://userguide.mdanalysis.org/stable/installation.html#conda suggests to install mamba inside the
mda env
conda create --name mdanalysis
conda activate mdanalysis
conda install -c ...
defect
installation
- 2
- Opened on Feb 28
- #405
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