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glenjasper/README.md

👋 Hi there, I'm Glen Jasper

Bioinformatician passionate about science, data, and collaborative innovation.


Glen-Python Glen-R Glen-Java Glen-Oracle Glen-MySQL Glen-Linux
  • 🔭 Currently focused on projects in bioinformatics, ecological networks, and applied genomics.
  • 🧪 Experienced in metagenomic data analysis, microbial taxonomy, and data processing pipelines.
  • 🌐 I develop solutions using R, Python, and other tools.

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  1. format-input format-input Public

    This script reads the exported (.csv|.txt) files from Scopus, Web of Science, PubMed, PubMed Central, Dimensions or Google Scholar exported from Publish or Perish databases and turns each of them i…

    Python 3

  2. remove-duplicates remove-duplicates Public

    This script eliminates the duplicated records from formatted .xlsx files from Scopus, Web of Science, PubMed, PubMed Central, Dimensions or Google Scholar exported from Publish or Perish. Is mandat…

    Python 3

  3. download-papers download-papers Public

    This scripts downloads .pdf files from formatted .xlsx files, via DOI.

    Python 2

  4. search-keywords search-keywords Public

    This script searches for the keywords, found in a .txt file, in the "Materials and Methods" section of each .txt file (created from .pdf files).

    Python

  5. SciDownl SciDownl Public

    Forked from Tishacy/SciDownl

    Download pdfs from Scihub via DOI. Easy to deal with captcha. Easy to update Scihub newest domains.

    Python

  6. pdf2txt pdf2txt Public

    This script converts .pdf files to .txt files.

    Python