Repositories list

• 136097

  Public
  Multiscale model of olfactory receptor neuron in mouse (Dougherty 2009)

  xppautolfactory-receptor-glu-cellaction-potential-initiation-oscillations-parameter

  1•0•1•1•Updated Jun 17, 2025Jun 17, 2025

• 136095

  Public
  Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)

  neuron-simulator

  AMPL

  •2•0•0•2•Updated Jun 17, 2025Jun 17, 2025

• 135903

  Public
  Network recruitment to coherent oscillations in a hippocampal model (Stacey et al. 2011)

  oscillationsneuron-simulatorhippocampus-ca1-pyramidal-glu-cell-hippocampus-ca3

  AMPL

  •1•0•0•1•Updated Jun 17, 2025Jun 17, 2025

• 135839

  Public
  AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008)

  neuron-simulator

  AMPL

  •1•0•1•1•Updated Jun 17, 2025Jun 17, 2025

• 135787

  Public
  Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)

  neuron-simulator

  AMPL

  •1•0•0•0•Updated Jun 17, 2025Jun 17, 2025

• 129071

  Public
  Continuous time stochastic model for neurite branching (van Elburg 2011)

  development

  C++

  •1•0•0•0•Updated Jun 17, 2025Jun 17, 2025

• 39949

  Public
  Spiny neuron model with dopamine-induced bistability (Gruber et al 2003)

  neuron-simulatorneostriatum-medium-spiny-direct-pathway-gaba-cellintrinsic-plasticity

  NMODL

  •1•0•0•1•Updated Jun 13, 2025Jun 13, 2025

• 2018017

  Public
  Depolarization baseline offset in CA1 pyramidal neurons (Kumar et al., 2025)

  moose-simulatorneuron-simulator

  AGS Script

  •0•0•0•0•Updated Jun 10, 2025Jun 10, 2025

• 2018266

  Public
  Counterfactual eraser (Gidon et al., 2025)

  neuron-simulator

  NMODL

  •0•0•0•0•Updated Jun 10, 2025Jun 10, 2025

• 128812

  Public
  Grid cell oscillatory interference with noisy network oscillators (Zilli and Hasselmo 2010)

  matlabneocortex-spiny-stellate-cell-abstract-integrate-aoscillations-synchronization-simplified-models-spi

  MATLAB

  •1•1•0•1•Updated Jun 6, 2025Jun 6, 2025

• 128559

  Public
  Mathematical model for windup (Aguiar et al. 2010)

  neuron-simulatorwide-dynamic-range-neuronactivity-patterns-action-potentials

  AMPL

  •2•0•0•2•Updated Jun 6, 2025Jun 6, 2025

• 128449

  Public
  Leaky integrate-and-fire model of spike frequency adaptation in the LGMD (Gabbiani and Krapp 2006)

  matlabspike-frequency-adaptationlocust-lobula-giant-movement-detector-lgmd-neuron-

  MATLAB

  •1•0•0•1•Updated Jun 6, 2025Jun 6, 2025

• 128079

  Public
  Fast sodium channel gating in mossy fiber axons (Schmidt-Hieber et al. 2010)

  neuron-simulatoraction-potential-initiationdentate-gyrus-granule-glu-cell

  Python

  •1•0•0•1•Updated Jun 6, 2025Jun 6, 2025

• 127996

  Public
  Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010)

  cerebellum-golgi-cellion-channel-kinetics-oscillations-synchronization-neuroconstruct-web-link-to-model-neuroml-web-link-

  JavaScript

  •1•0•0•1•Updated Jun 6, 2025Jun 6, 2025

• 127887

  Public
  Spectral method and high-order finite differences for nonlinear cable (Omurtag and Lytton 2010)

  MATLAB

  •1•0•0•1•Updated Jun 6, 2025Jun 6, 2025

• 127388

  Public
  Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010)

  neuron-simulator

  AMPL

  •3•0•0•2•Updated Jun 5, 2025Jun 5, 2025

• 127351

  Public
  A two-stage model of dendritic integration in CA1 pyramidal neurons (Katz et al. 2009)

  neuron-simulatorhippocampus-ca1-pyramidal-glu-cellsynaptic-integration

  HTML

  •1•0•0•1•Updated Jun 5, 2025Jun 5, 2025

• 127021

  Public
  Alcohol excites Cerebellar Golgi Cells by inhibiting the Na+/K+ ATPase (Botta et al.2010)

  neuron-simulatorcerebellum-golgi-celldetailed-neuronal-models-markov-type-model-alcohol

  AMPL

  •3•0•0•2•Updated Jun 5, 2025Jun 5, 2025

• 126637

  Public
  A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011)

  neuron-simulatorcerebellum-purkinje-gaba-celldendritic-action-potentials-simplified-models-acti

  AMPL

  •1•0•0•1•Updated Jun 5, 2025Jun 5, 2025

• 126389

  Public
  Auditory nerve spontaneous rate histograms (Jackson and Carney 2005)

  auditory-nerveactivity-patterns-audition

  HTML

  •1•0•0•1•Updated Jun 5, 2025Jun 5, 2025

• 126392

  Public
  Response properties of an integrate and fire model (Zhang and Carney 2005)

  audition

  HTML

  •1•0•0•1•Updated Jun 5, 2025Jun 5, 2025

• 126489

  Public
  Models analysis for auditory-nerve synapse (Zhang and Carney 2005)

  auditionauditory-nervematlab-web-link-to-model

  MATLAB

  •1•0•0•1•Updated Jun 4, 2025Jun 4, 2025

• 126467

  Public
  Cardiac sarcomere dynamics (Negroni and Lascano 1996)

  neuron-simulatorcalcium-dynamicsheart-cell

  AMPL

  •1•0•0•1•Updated Jun 4, 2025Jun 4, 2025

• 126371

  Public
  Encoding and discrimination of vowel-like sounds (Tan and Carney 2005)

  auditory-nervetemporal-pattern-generation-audition

  HTML

  •1•0•0•1•Updated Jun 4, 2025Jun 4, 2025

• 125857

  Public
  A Fast Rhythmic Bursting Cell: in vivo cell modeling (Lee 2007)

  neuron-simulatoractivity-patterns-bursting-spatio-temporal-activit

  AMPL

  •1•0•0•1•Updated Jun 4, 2025Jun 4, 2025

• 125745

  Public
  Calcium waves in neuroblastoma cells (Fink et al. 2000)

  neuron-simulatorneuroblastomacalcium-dynamics-calcium-waves

  AMPL

  •1•0•0•1•Updated Jun 3, 2025Jun 3, 2025

• 125733

  Public
  Hippocampus CA1: Temporal sensitivity of signaling pathways underlying LTP (Kim et al. 2010)

  xppauthippocampus-ca1-pyramidal-glu-celllong-term-synaptic-plasticity-signaling-pathways

  2•0•2•2•Updated Jun 3, 2025Jun 3, 2025

• 125689

  Public
  Balance of excitation and inhibition (Carvalho and Buonomano 2009)

  neuron-simulatorsynaptic-integration

  MATLAB

  •1•0•0•1•Updated Jun 3, 2025Jun 3, 2025

• 125683

  Public
  Deterministic chaos in a mathematical model of a snail neuron (Komendantov and Kononenko 1996)

  xppauthelix-pacemaker-bursting-neuron-rpa1activity-patterns-bursting-invertebrate-calcium-dy

  1•0•0•1•Updated Jun 3, 2025Jun 3, 2025

• 125676

  Public
  Ca2+ current versus Ca2+ channel cooperativity of exocytosis (Matveev et al. 2009)

  calcium-dynamicscalc-calcium-calculator-web-link-to-model

  MATLAB

  •1•0•0•1•Updated Jun 3, 2025Jun 3, 2025