This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM
Optimizing IDPs directly at the level of simulations via a continuous sequence representation.
All Python package to compute small angle X-ray scattering (SAXS) profiles in one-bead-per-residue approximation with numpy
Exploring IDP and metagenomes, software suite
This repository contains data and input files for the manuscript entitled "An integrative characterisation of proline cis and trans conformers in a disordered peptide' by Pettitt et al. DOI: 10.1016/j.bpj.2024.09.028
Scripts from my PhD for a thesis published by University College London
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