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@CarragherLab

CarragherLab

Edinburgh Drug Discovery group, Cancer Research UK Edinburgh Centre

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  1. cptools2 Public

    Running cellprofiler on eddie3 / SGE clusters

    Python 5 5

  2. scissorhands Public

    Generate eddie3 submission scripts in python

    Python

  3. meld Public

    Collect distributed cellprofiler results into sqlite databases.

    Python 1

  4. parserix Public

    parse metadata from ImageXpress paths

    Python

  5. ImageXpressR Public

    R package for extracting metadata from ImageXpress file paths

    R

Repositories

Showing 10 of 11 repositories
  • sc_morph_tracking Public

    The script for article "Single-cell morphological tracking of cell states to identify small-molecule modulators of liver differentiation".

    R 0 0 0 0 Updated Aug 16, 2024
  • phenonaut Public

    A tool for exploration of multiomic phenotypic space

    Python 9 Apache-2.0 2 0 0 Updated Aug 5, 2024
  • install_cellprofiler Public

    Documentation and scripts to install CellProfiler on eddie3

    Shell 0 1 0 0 Updated Apr 28, 2022
  • meld Public

    Collect distributed cellprofiler results into sqlite databases.

    Python 0 1 4 0 Updated Nov 24, 2021
  • cptools2 Public

    Running cellprofiler on eddie3 / SGE clusters

    Python 5 5 15 3 Updated Jun 24, 2021
  • parserix Public

    parse metadata from ImageXpress paths

    Python 0 0 0 0 Updated May 10, 2021
  • scissorhands Public

    Generate eddie3 submission scripts in python

    Python 0 MIT 0 0 0 Updated May 4, 2021
  • 2018-08_transfer_ML_between_cell_lines Public
    Python 3 1 1 0 Updated Nov 8, 2018
  • cpchecker Public

    Check for failed cellprofiler jobs on eddie3

    Python 0 0 0 0 Updated Oct 3, 2018
  • CellProfiler Public Forked from CellProfiler/CellProfiler

    An open-source application for biological image analysis

    Python 0 397 0 0 Updated Sep 24, 2018
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