Pavlidis lab
The Pavlidis Lab at the University of British Columbia
- 13 followers
- Vancouver, British Columbia, Canada
- https://pavlab.msl.ubc.ca
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Repositories
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- sc-annotation-pipeline Public
- rnaseq-pipeline Public
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
- TR_aggregation Public
Contains the code for "Characterizing the targets of transcription regulators by aggregating ChIP-seq and perturbation expression data sets"
- aggregate_microglia Public
This project looks to aggregate single cell coexpression patterns for microglial datasets
- TR_singlecell Public
This repo contains the code for my paper on reproducible TR coexpression patterns using single cell RNA-seq
