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Hi,
When I try to download data for a relatively large number of genomes, e.g.:
ncbi-genome-download bacteria -t 562 -l complete -F assembly-report
I get the following error message:
ERROR: Download from NCBI failed: ConnectionError(ProtocolError('Connection aborted.', RemoteDisconnected('Remote end closed connection without response')))
I don't get this issue when downloading only one or a few genomes.
Looking at similar issues it seems that a Connection Error is usually due to the connection of users themselves, and not an error caused by ncbi-genome-download. However because the connection is closed by the remote end, I'm not sure.
If anyone could help me out that'd be greatly appreciated!
Best,
Lisa
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