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PyPath v1.0 - The Big Refactoring -- Main milestones: New reader, pre-processor and network builder | Good test coverage | Reorganization of modules | Remove unused, broken, old modules | Move toolbox into independent module | Move services/general purpose classes/functions into independent module | Move data and parameters into JSON | Updated docs and tutorial | Organize imports better | Rename module | Licenses | Docker/other image. In order not to break the current working version and also not to mess with our parallel work, we decided to keep `master` and `dev` kind of "frozen" and start a sub-tree for the big refactoring. This is, have a kind of "master" `refactor` branch and from there sub-branches focused on the different points/tasks (e.g. reader module, imports, JSONs...) for instance `refactor/reader` or `refactor/imports` and so on. These will be merged/pull-requested to the main `refactor` branch so we can link to this milestone and cross-review all the changes we're implementing.
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