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UW Sauro Lab

27 followers
Seattle
http://www.sys-bio.org
hsauro@u.washington.edu

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tellurium tellurium Public

Python Environment for Modeling and Simulating Biological Systems

Python 118 37
roadrunner roadrunner Public

Forked from AndySomogyi/sbmlsolver

libRoadRunner: A high-performance SBML simulator

C++ 50 26

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Showing 10 of 115 repositories

SBMLNetwork Public Forked from adelhpour/SBMLNetwork
SBMLNetwork is a library designed to enable software developers and systems biologists to interact with the graphical representation of SBML (Systems Biology Markup Language) models.

sys-bio/SBMLNetwork’s past year of commit activity

C++ 0 MIT 1 5 0 Updated Jul 4, 2025
tellurium Public
Python Environment for Modeling and Simulating Biological Systems

sys-bio/tellurium’s past year of commit activity

Python 118 Apache-2.0 37 126 4 Updated Jul 3, 2025
antimony Public

sys-bio/antimony’s past year of commit activity

C++ 18 BSD-3-Clause 4 17 0 Updated Jul 3, 2025
SimpleSEDML Public
A simple API for using the Simulation Experiment Description Markup Language (SED-ML)

sys-bio/SimpleSEDML’s past year of commit activity

Jupyter Notebook 0 MIT 1 2 1 Updated Jul 3, 2025
BMCA-pipeline Public Forked from janisshin/BMCA-pipeline

sys-bio/BMCA-pipeline’s past year of commit activity

Jupyter Notebook 0 MIT 1 0 0 Updated Jul 3, 2025
roadrunner Public Forked from AndySomogyi/sbmlsolver
libRoadRunner: A high-performance SBML simulator

sys-bio/roadrunner’s past year of commit activity

C++ 50 34 80 (1 issue needs help) 2 Updated Jul 2, 2025
temp-biomodels Public
Temporary place for coordination of updating existing Biomodels

sys-bio/temp-biomodels’s past year of commit activity

Component Pascal 2 CC0-1.0 2 15 0 Updated Jul 1, 2025
BiomodelsCache Public
A biomodels cache for faster lookup.

sys-bio/BiomodelsCache’s past year of commit activity

Python 0 CC0-1.0 1 0 0 Updated Jun 30, 2025
BiomodelsStore Public Forked from konankisa/BiomodelsStore

sys-bio/BiomodelsStore’s past year of commit activity

JavaScript 0 1 0 0 Updated Jul 1, 2025
ratesb_python Public
Analysis of rate laws in reaction networks.

sys-bio/ratesb_python’s past year of commit activity

Python 1 MIT 2 8 1 Updated Jun 29, 2025

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